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Series GSE220055 Query DataSets for GSE220055
Status Public on Nov 27, 2023
Title Suclg2 maintains the tolerogenic function of regulatory dendritic cells by suppressing Lactb succinylation [si-nc/si-Suclg2]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Purpose: mRNAs sequencing of the gene expression differences in diffDC transfected with si-nc or si-Suclg2, the goals of this study are to investigate the biological effect of the metabolic enzyme succinate-CoA ligase subunit beta Suclg2 in regulating regulatory DC differentiation and function.
 
Overall design Bone marrow cells from C57/BL6 mice were cultured with GM-CSF and IL-4 for 6 days and stimulated with LPS for 24 hours to generate bone-marrow derived DC (BMDC). CD11c+ BMDC were isolated by anti-mouse CD11c magbeads to generate maDC. maDC were then cocultured with spleen stroma cells for 9 days to generate diffDC. And then diffDCs were transfected with si-Suclg2 or si-nc. diffDCs transfected with si-Suclg2 or si-nc were subjected to RNA seq.
 
Contributor(s) Zhang X, Cao X
Citation(s) 37216870
Submission date Dec 04, 2022
Last update date Nov 27, 2023
Contact name xiaomin zhang
E-mail(s) xiaoxiao0666@126.com
Phone 18217743328
Organization name National Key Laboratory of Medical Immunology & Institute of Immunology, Naval Military Medical University
Street address 800 Xiang Yin Road
City shanghai
ZIP/Postal code 200433
Country China
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (8)
GSM6784426 si-nc_1 [DN1]
GSM6784427 si-nc_2 [DN2]
GSM6784428 si-nc_3 [DN3]
Relations
BioProject PRJNA908261

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE220055_diffDC_transfected_with_si-nc_or_si-Suclg2_mRNA.GeneDiffExp.xlsx 1.9 Mb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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