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Series GSE224555 Query DataSets for GSE224555
Status Public on Mar 11, 2024
Title Z-DNA underlies the target choice of Aire by facilitating promoter poising [CUT&Tag]
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We profiled Pol II-pS5 binding in medullary thymic epithelial cells using CUT&Tag to investigate the logic of Aire's target choices
 
Overall design CUT&Tag of mTECs
 
Contributor(s) Fang Y, Mathis D, Benoist C
Citation(s) 38480882
Submission date Feb 05, 2023
Last update date Apr 12, 2024
Contact name CBDM Lab
E-mail(s) cbdm@hms.harvard.edu
Phone 617-432-7747
Organization name Harvard Medical School
Department Microbiology and Immunobiology
Lab CBDM
Street address 77 Avenue Louis Pasteur
City Boston
State/province MA
ZIP/Postal code 02215
Country USA
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (5)
GSM7025901 WT_PolII_pS5_CutTag_rep1
GSM7025902 WT_PolII_pS5_CutTag_rep2
GSM7025903 Aire_KO_PolII_pS5_CutTag_rep1
This SubSeries is part of SuperSeries:
GSE224557 Z-DNA underlies the target choice of Aire by facilitating promoter poising
Relations
BioProject PRJNA934446

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE224555_RAW.tar 16.0 Mb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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