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Series GSE22525 Query DataSets for GSE22525
Status Public on Sep 20, 2012
Title Minimal peroxide exposure of neuronal cells induces multifaceted adaptive responses.
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Oxidative exposure of cells occurs naturally and may be associated with cellular damage and dysfunction. Protracted low level oxidative exposure can induce accumulated cell disruption, affecting multiple cellular functions. Accumulated oxidative exposure has also been proposed as one of the potential hallmarks of the physiological/pathophysiological aging process. We investigated the multifactorial effects of long-term minimal peroxide exposure upon SH-SY5Y neural cells to understand how they respond to the continued presence of oxidative stressors. We show that minimal protracted oxidative stresses induce complex molecular and physiological alterations in cell functionality. Upon chronic exposure to minimal doses of hydrogen peroxide, SH-SY5Y cells displayed a multifactorial response to the stressor. To fully appreciate the peroxide-mediated cellular effects, we assessed these adaptive effects at the genomic, proteomic and cellular signal processing level. Combined analyses of these multiple levels of investigation revealed a complex cellular adaptive response to the protracted peroxide exposure. This adaptive response involved changes in cytoskeletal structure, energy metabolic shifts towards glycolysis and selective alterations in transmembrane receptor activity. Our analyses of the global responses to chronic stressor exposure, at multiple biological levels, revealed a viable neural phenotype in-part reminiscent of aged or damaged neural tissue. Our paradigm indicates how cellular physiology can subtly change in different contexts and potentially aid the appreciation of stress response adaptations.

 
Overall design SH-SY5Y cells were maintained at 37oC in a humidified 5% CO2 incubator in AMEM/F12 supplemented with 10% FBS, 100 units/ml ?penicillin and 100 units/ml streptomycin. Cells were treated with either phosphate-buffered saline (PBS) (CTR), or 10nM hydrogen peroxide(CMP) (H2O2: Sigma Aldrich, St Louis MO) for seven days. Cell growth media and applied hydrogen peroxide treatments were changed daily. Both control and hydrogen peroxide treated SH-SY5Y cell were serum-starved overnight prior to ligand stimulations with either, Beta-methylcholine(BMC) (Calbiochem, Gibbstown NJ) or 10ng/ml brain derived neurotrophic factor (BDNF) (Invitrogen, Carlsbad CA) for 2, 4, or 8 hours. Cells were then collected and used to generate total RNA.
 
Contributor(s) Chadwick W, Zhou Y, Wang L, Park S, Mitchell N, Stone MD, Becker KG, Martin B, Maudsley S
Citation(s) 21179406
Submission date Jun 23, 2010
Last update date Jun 22, 2020
Contact name Supriyo De
Organization name NIA-IRP, NIH
Department Laboratory of Genetics and Genomics
Lab Computational Biology & Genomics Core
Street address 251 Bayview Blvd
City Baltimore
State/province Maryland
ZIP/Postal code 21224
Country USA
 
Platforms (1)
GPL6947 Illumina HumanHT-12 V3.0 expression beadchip
Samples (42)
GSM559307 CTR1
GSM559308 CTR2
GSM559309 CTR3
Relations
BioProject PRJNA128595

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE22525_RAW.tar 6.2 Mb (http)(custom) TAR
GSE22525_non-normalized.txt.gz 21.2 Mb (ftp)(http) TXT
Processed data included within Sample table

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