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Series GSE225818 Query DataSets for GSE225818
Status Public on Nov 24, 2023
Title Effect of iRhom1(RHBDF1) KO in cancer cells
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary To investigate the function iRhom1 in the cancer development, we established CT26 cell lines in which iRhom1 has been knocked down by CRISPR system.
Overall design Comparative gene expression profiling analysis of RNA-seq data for Control CT26 cell and its KO derivatives iRhom1 KO
Contributor(s) Luo Z, Li S
Citation(s) 38177179
Submission date Feb 22, 2023
Last update date Jan 16, 2024
Contact name Zhangyi Luo
Phone 4124785600
Organization name University of Pittsburgh
Street address 4041 Bigelow Blvd, Apt 112
City Pittsburgh
State/province PA
ZIP/Postal code 15213-1235
Country USA
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (4)
GSM7057012 CT26 cells, Control, Rep1
GSM7057013 CT26 cells, Control, Rep2
GSM7057014 CT26 cells, iRhom KO, Rep1
BioProject PRJNA937670

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE225818_gene_expression_original.csv.gz 714.0 Kb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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