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Series GSE225949 Query DataSets for GSE225949
Status Public on Mar 17, 2023
Title Rubella virus infection in endothelial cells reduces angiogenesis via interferon betainduced CXCL10
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Rubella virus infection during pregnancy can result in abortion, stillbirth and severe defects in embryogenesis resulting in congenital rubella syndrome (CRS). Low vaccination coverage in developing regions results in estimated 100,000 CRS cases in infants per year with a mortality rate over 30%. The molecular pathomechanisms and potential treatments remain largely unexplored. Endothelial cells (EC) of the placenta are infected by rubella virus (RuV). RuV reduced angiogenic and migratory capacity of primary human EC whereas cell cycle and apoptosis rate were not affected. Next generation sequencing analysis revealed an induction of antiviral type I and III interferons (IFN) that induced angiogenesis-inhibiting cytokines such as CXCL10. The transcriptional profile induced by RuV resembled the effects of IFN-β treatment. The cell culture data were confirmed using human serum from RuV IgM-positive patients that showed similar increase in CXCL10 and inhibited angiogenesis. RuV-mediated inhibition of angiogenesis was reversed by treatment with blocking and neutralizing antibodies targeting CXCL10 and IFN-β receptor. The data identify an important role for anti-viral IFN-mediated induction of CXCL10 in controlling EC function during RuV infection
 
Overall design Comparative gene expression analysis of RNA-seq data of endothelial cells after treatment with Rubella and/or IFN-β and/or IFN-λ1
 
Contributor(s) Henschke V, Konstanze H, Schilling E, Haas J, Filipova V, Erbe S, König R, Huebschen J, Laufs U, Claus C, Boeckel J
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Submission date Feb 23, 2023
Last update date Mar 17, 2023
Contact name Jes-Niels Boeckel
E-mail(s) Jes-Niels.Boeckel@medizin.uni-leipzig.de
Organization name Universitätsklinikum Leipzig
Department Klinik und Poliklinik für Kardiologie
Lab AG Boeckel
Street address Johannisalle 30
City Leipzig
ZIP/Postal code 04103
Country Germany
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (19)
GSM7060844 RUBELLA-1 SID14603_fpkm
GSM7060845 RUBELLA-2 SID14608_fpkm
GSM7060846 RUBELLA-4 SID14618_fpkm
Relations
BioProject PRJNA938090

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE225949_Gene_exp_FPKM_HUVEC-07-09-2020.xlsx 17.5 Mb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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