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Series GSE226683 Query DataSets for GSE226683
Status Public on Mar 13, 2023
Title Osr1 controls the pro-regenerative response of Fibro-Adipogenic Progenitors
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Purpose: To study the requirement of Osr1 expression for FAP function during skeletal muscle regeneration.
Methods: We sequenced total mRNAs isolated from adult FAPs FACS sorted from 3 and 7 day post injured hindlimb skeletal muscle of Ctrl (Osr1flox/+ CAGG Cre+) and Osr1 cKO (Osr1flox/flox CAGG Cre+) mice.
Results: Loss of Osr1 leads to pro-fibrotic orientation of FAPs and impairs both FAP-macrophage and FAP-MuSCs communication network resulting in impaired regenerative myogenesis and persistent fibrosis.
Conclusions: Osr1 is a key transcriptional regulator of FAP regenerative function protecting FAPs from assuming a detrimental pro-fibrotic and anti-myogenic state.
 
Overall design Sequencing was performed on RNAs isolated from adult FAPs FACS sorted from 3 and 7 days post injured hindlimb skeletal muscle of Ctrl (Osr1flox/+ CAGG Cre+) and Osr1 cKO (Osr1flox/flox CAGG Cre+) mice.
Web link https://www.nature.com/articles/s41536-023-00291-6
 
Contributor(s) Kotsaris G, Stricker S
Citation(s) 37019910
BioProject PRJNA938360
Submission date Mar 06, 2023
Last update date Apr 27, 2023
Contact name Georgios Kotsaris
E-mail(s) georgios.kotsaris@fu-berlin.de
Organization name Freie Universität Berlin
Street address Thielallee, 63
City Berlin
ZIP/Postal code 14195
Country Germany
 
Platforms (1)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (8)
GSM7081638 FAPs_Ctrl_3dpi_rep1
GSM7081639 FAPs_Ctrl_3dpi_rep2 
GSM7081640 FAPs_cKO_3dpi_rep1

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE226683_RAW.tar 2.4 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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