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Series GSE227206 Query DataSets for GSE227206
Status Public on Mar 19, 2023
Title Lipid engulfed macrophages interfere with protective T cell immunity and favor tumor progression in human colon carcinogenesis
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Obesity and altered lipid metabolism is associated with colorectal cancer (CRC). In this context, the presence of colonic lipid-engulfed macrophages (foam cells, FC) may be involved in hindering protective T cell immunity, thus favoring gut carcinogenesis.
 
Overall design By analysing FC-enriched versus FC-deprived tissues of in precancerous intestinal lesions and stage I-II CRC, we investigated the function of dyslipidemic myeloid subsets with respect to antitumoral immunosurveillance.
 
Contributor(s) Daveri E, Ferrero G, Rivoltini L
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Submission date Mar 13, 2023
Last update date Mar 20, 2023
Contact name Giulio Ferrero
Organization name University of Turin
Department Dept. Clinical and Biological Sciences
Street address Regione Gonzole, 10
City Orbassano
State/province TO
ZIP/Postal code 10043
Country Italy
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (14)
GSM7093178 id_2 - FAP - FOAM high
GSM7093179 id_3 - FAP - FOAM high
GSM7093180 id_4 - Cancer - FOAM high
Relations
BioProject PRJNA944128

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE227206_Table_Expression_levels_TPM.tsv.gz 1.9 Mb (ftp)(http) TSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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