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Series GSE227249 Query DataSets for GSE227249
Status Public on Mar 19, 2023
Title Pre-weaning heat stress alters liver DNA methylation in dairy calves [Bisulfite-Seq]
Organism Bos taurus
Experiment type Methylation profiling by high throughput sequencing
Summary The impact of postnatal heat stress exposure in neonatal calves is not well-understood, and adequate heat abatement methods during the pre-weaning phase are lacking. This study aimed to investigate the impact of pre-weaning heat stress on liver DNA methylation profiles.
 
Overall design Holstein dairy calves were group housed and exposed to postnatal heat stress (HS; n = 6) or postnatal cooling (CL; n = 6) from birth to weaning. Liver tissue samples were harvested via biopsy at 42 days of age for Reduced-Representation Bisulfite Sequencing (RRBS-seq).
 
Contributor(s) Laporta J, Peñagaricano F
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Submission date Mar 13, 2023
Last update date Mar 21, 2023
Contact name Francisco Peñagaricano
E-mail(s) fpenagarican@wisc.edu
Organization name University of Wisconsin-Madison
Department Animal and Dairy Sciences
Street address 1675 Observatory Drive
City Madison
State/province Wisconsin
ZIP/Postal code 53706
Country USA
 
Platforms (1)
GPL23295 Illumina HiSeq 4000 (Bos taurus)
Samples (11)
GSM7093891 L7062
GSM7093892 L7084
GSM7093893 L7094
This SubSeries is part of SuperSeries:
GSE227325 Pre-weaning heat stress alters liver DNA methylation in dairy calves
Relations
BioProject PRJNA944231

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE227249_RAW.tar 398.0 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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