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Series GSE227910 Query DataSets for GSE227910
Status Public on Mar 27, 2023
Title Treatment of 1,25(OH)2D3 or Antagonist in HCT116 WT and VDRKO cell lines
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Purpose: The goals of this study are to compare gene expression between Wild Type and VDR KO in HCT116 cell lines.
 
Overall design Examination of triplicate, 2 different treatment in 2 cell types.
 
Contributor(s) Kanemoto Y, Iwaki M, Sawada T, Nagasawa K, Kato S
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Submission date Mar 22, 2023
Last update date Mar 30, 2023
Contact name Yoshiaki Kanemoto
E-mail(s) ykanemo164@gmail.com
Phone 0246815522
Organization name Jyoban Hospital
Street address kaminodai 57, jyobankamiyunagaya-town
City Iwaki
State/province Fukushima
ZIP/Postal code 972-8322
Country Japan
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (30)
GSM7110632 parent, Vehicle,1
GSM7110633 parent, 1,25(OH)2D3,1
GSM7110634 parent, antagonist,1
Relations
BioProject PRJNA947489

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE227910_RAW.tar 4.6 Gb (http)(custom) TAR (of BW)
GSE227910_gene-FPKM_name.txt.gz 14.1 Mb (ftp)(http) TXT
GSE227910_gene-featureCount-else-int_name.txt.gz 7.6 Mb (ftp)(http) TXT
GSE227910_transcript-FPKM_name.txt.gz 46.9 Mb (ftp)(http) TXT
GSE227910_transcript-featureCount-else-int_name.txt.gz 13.1 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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