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Series GSE22947 Query DataSets for GSE22947
Status Public on Dec 31, 2010
Title Expression data from in-vitro induced Interfascicular Cambium of Arabidopsis thaliana
Organism Arabidopsis thaliana
Experiment type Expression profiling by array
Summary In-vitro induced establishment and activity of the interfascicular cambium in Arabidopsis thaliana stems under auxin treatments.
We used microarrays to detail the global programme of gene expression underlying the establishment and activity of the interfascicular cambium and identified tissue-speciffic up-regulated genes during this process.
 
Overall design Different tissue types from in-vitro auxin treated stems were selected at successive stages of cambium establishment using laser capture microdissection for RNA extraction and hybridization on Affymetrix microarrays. We aimed to obtain genes exclussively upregulated in the interfascicular region responsible for cambium establishment and activity.
 
Contributor(s) Agusti J, Greb T
Citation(s) 21379334
Submission date Jul 15, 2010
Last update date Aug 19, 2019
Contact name Javier Agusti
E-mail(s) javier.agusti@gmi.oeaw.ac.at
Phone +43-(0)1-79044-9871
Organization name Gregor Mendel Institute
Lab Greb
Street address Dr. Bohr-Gasse 3
City Wien
ZIP/Postal code 1030
Country Austria
 
Platforms (1)
GPL198 [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array
Samples (24)
GSM566554 Starch sheath at T0, biological rep1
GSM566555 Starch sheath at T0, biological rep2
GSM566556 Starch sheath at T0, biological rep3
Relations
Affiliated with GSE69995
BioProject PRJNA127793

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE22947_RAW.tar 40.3 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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