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| Status |
Public on Apr 30, 2023 |
| Title |
Gene expression profile at single cell level of cells from the murine small intestine (SI) lacking functional Apc. |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We used single cell RNA sequencing (scRNA-seq) to analyze the diversity of cells within the murine small intestine in the absence of functional Apc.
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| Overall design |
Cells from a 5-15cm portion of small intestine were isolated from mice with short term Apc inactivation, before analysis with scRNAseq
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| Contributor(s) |
Vande Voorde J, Raven A, Mills M, Gilroy K, Sansom O |
| Citation(s) |
37580540 |
| |
| Submission date |
Apr 13, 2023 |
| Last update date |
Sep 14, 2023 |
| Contact name |
Kathryn Gilroy |
| E-mail(s) |
K.gilroy@beatson.gla.ac.uk
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| Organization name |
Beatson Institute for Cancer Research
|
| Street address |
Garscube
|
| City |
Glasgow |
| ZIP/Postal code |
G611BD |
| Country |
United Kingdom |
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| Platforms (1) |
| GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
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| Samples (2) |
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| This SubSeries is part of SuperSeries: |
| GSE229648 |
Metabolic profiling stratifies colorectal cancer and reveals adenosylhomocysteinase as a therapeutic target |
|
| Relations |
| BioProject |
PRJNA955216 |
