NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE230658 Query DataSets for GSE230658
Status Public on Nov 28, 2023
Title Transcriptional profiling of rainbow trout infected with Aeromonas salmonicida
Organism Oncorhynchus mykiss
Experiment type Expression profiling by array
Summary The rainbow trout (Oncorhynchus mykiss) is one of the most important aquaculture species worlwide. In this study, transcriptional profiling of skin by oligonucleotide microarray was applied to rainbow trout individuals infected with A. salmonicida, to identified enriched genes involved in pathogen response.
 
Overall design Gene expression changes in skin after infection were assessed with 44 k oligonucleotide microarray using Rainbow trout samples (n=7)
 
Contributor(s) Malachowicz M, Wenne R
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Apr 26, 2023
Last update date Nov 29, 2023
Contact name Magdalena Malachowicz
E-mail(s) mwarzecha@iopan.gda.pl
Organization name Institute of Oceanology Polish Academy of Sciences
Street address Powstańców Warszawy
City Sopot
ZIP/Postal code 81-712
Country Poland
 
Platforms (1)
GPL16819 Agilent-028639 RTIQ Oncorhynchus mykiss
Samples (7)
GSM7230744 Rainbow trout_infection_1
GSM7230745 Rainbow trout_infection_2
GSM7230746 Rainbow trout_infection_3
Relations
BioProject PRJNA962080

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE230658_RAW.tar 90.1 Mb (http)(custom) TAR (of TXT)
GSE230658_processed_data_matrix.txt.gz 1.9 Mb (ftp)(http) TXT
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap