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Series GSE23110 Query DataSets for GSE23110
Status Public on Aug 15, 2010
Title DNA methylation data from mouse hematopoietic progenitors
Organism Mus musculus
Experiment type Methylation profiling by genome tiling array
Summary Genome-wide DNA methylation was studied to determine the methylome map of lymphoid and myeoloid commitment from hematopoietic progenitors
We used custom Nimblegen microarrays to determine the genome-wide DNA methylation in FACs purified mouse hematopoietic progeniors
Overall design We isolated genomic DNA from mouse MPPFL-, MPPFL+, CLP, DN1, DN2, DN3, CMP and GMP cells and hybridized to custom-designed Nimblegen microarrays (CHARM arrays).
Contributor(s) Ji H, Ehrlich LI, Seita J, Weissman IL, Feinberg AP
Citation(s) 20720541
Submission date Jul 23, 2010
Last update date Mar 22, 2012
Contact name Hong Ji
Organization name Johns hopkins school of Medicine
Department Medicine
Lab Feinberg Lab
Street address 855 N Wolfe Street, Rangos 580
City Baltimore
State/province MD
ZIP/Postal code 21210
Country USA
Platforms (2)
GPL10680 NimbleGen Mouse 2.1M array [Feinberg_MM8_Me_HX1]
GPL10683 NimbleGen Mouse 2.1M array [100512_MM8_CHARM_HX1]
Samples (35)
GSM569870 DN1 methyl-depleted
GSM569871 DN1_2 methyl-depleted
GSM569872 DN1_3 methyl-depleted
BioProject PRJNA131495

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE23110_RAW.tar 1.1 Gb (http)(custom) TAR (of XYS)
Processed data included within Sample table

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