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Series GSE231130 Query DataSets for GSE231130
Status Public on Apr 30, 2023
Title TF ChIP-seq from layer of hippocampus (ENCSR877MSN)
Project Mouse ENCODE
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf
 
Overall design https://www.encodeproject.org/ENCSR877MSN/
 
Citation(s) 22955616
BioProject PRJNA63471
Submission date Apr 28, 2023
Last update date May 02, 2023
Contact name ENCODE DCC
E-mail(s) encode-help@lists.stanford.edu
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (4)
GSM7251544 TF ChIP-seq from layer of hippocampus (ENCLB143GUD)
GSM7251545 TF ChIP-seq from layer of hippocampus (ENCLB148AZB)
GSM7251546 TF ChIP-seq from layer of hippocampus (ENCLB330FTF)

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE231130_ENCFF008YIW_IDR_ranked_peaks_mm10.bed.gz 8.9 Mb (ftp)(http) BED
GSE231130_ENCFF044NEJ_IDR_thresholded_peaks_mm10.bed.gz 1.2 Mb (ftp)(http) BED
GSE231130_ENCFF093ZRU_conservative_IDR_thresholded_peaks_mm10.bed.gz 1.4 Mb (ftp)(http) BED
GSE231130_ENCFF121WNF_IDR_ranked_peaks_mm10.bed.gz 7.9 Mb (ftp)(http) BED
GSE231130_ENCFF257NKH_IDR_thresholded_peaks_mm10.bed.gz 1.2 Mb (ftp)(http) BED
GSE231130_ENCFF353WRL_conservative_IDR_thresholded_peaks_mm10.bigBed 2.6 Mb (ftp)(http) BIGBED
GSE231130_ENCFF458MEM_IDR_thresholded_peaks_mm10.bed.gz 1.1 Mb (ftp)(http) BED
GSE231130_ENCFF488URG_IDR_ranked_peaks_mm10.bed.gz 9.4 Mb (ftp)(http) BED
GSE231130_ENCFF553EIY_IDR_ranked_peaks_mm10.bed.gz 8.4 Mb (ftp)(http) BED
GSE231130_ENCFF588UXR_IDR_thresholded_peaks_mm10.bigBed 2.3 Mb (ftp)(http) BIGBED
GSE231130_ENCFF654PZZ_fold_change_over_control_mm10.bigWig 1.2 Gb (ftp)(http) BIGWIG
GSE231130_ENCFF656RDZ_signal_p-value_mm10.bigWig 608.0 Mb (ftp)(http) BIGWIG
GSE231130_ENCFF700FJI_signal_p-value_mm10.bigWig 936.4 Mb (ftp)(http) BIGWIG
GSE231130_ENCFF706BZC_fold_change_over_control_mm10.bigWig 761.4 Mb (ftp)(http) BIGWIG
GSE231130_ENCFF711VWC_signal_p-value_mm10.bigWig 600.7 Mb (ftp)(http) BIGWIG
GSE231130_ENCFF750SFW_IDR_thresholded_peaks_mm10.bigBed 2.2 Mb (ftp)(http) BIGBED
GSE231130_ENCFF759SYQ_IDR_thresholded_peaks_mm10.bigBed 2.1 Mb (ftp)(http) BIGBED
GSE231130_ENCFF929GBA_fold_change_over_control_mm10.bigWig 753.6 Mb (ftp)(http) BIGWIG
GSE231130_RAW.tar 10.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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