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Series GSE231565 Query DataSets for GSE231565
Status Public on Aug 28, 2023
Title Chromatin remodeling of histone H3 variants by DDM1 underlies epigenetic inheritance of DNA methylation.
Organism Arabidopsis thaliana
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Methylation profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 37643610
Submission date May 03, 2023
Last update date Nov 28, 2023
Contact name Jonathan Cahn
E-mail(s) cahnjonathan@gmail.com
Organization name CSHL
Street address 1 Bungtown Rd
City Cold Spring Harbor
State/province NY
ZIP/Postal code 11724
Country USA
 
Platforms (3)
GPL17639 Illumina HiSeq 2500 (Arabidopsis thaliana)
GPL19580 Illumina NextSeq 500 (Arabidopsis thaliana)
GPL30821 NextSeq 2000 (Arabidopsis thaliana)
Samples (52)
GSM7290814 DDM1 ChIP-seq in WT biol Rep1
GSM7290815 Input for DDM1 ChIP-seq in WT biol Rep1
GSM7290816 DDM1 ChIP-seq in WT biol Rep2
This SuperSeries is composed of the following SubSeries:
GSE231563 Chromatin remodeling of histone H3 variants by DDM1 underlies epigenetic inheritance of DNA methylation [ChIP-seq]
GSE231564 Chromatin remodeling of histone H3 variants by DDM1 underlies epigenetic inheritance of DNA methylation [bisulfite-seq]
Relations
BioProject PRJNA966971

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE231565_RAW.tar 10.6 Gb (http)(custom) TAR (of BW)
SRA Run SelectorHelp

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