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| Status |
Public on Jun 07, 2023 |
| Title |
Visium Spatial Transcriptomics of a murine model of IPMN |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
Other
|
| Summary |
Pancreata were collected from two Kras;Gnas mice and analyzed by Visium Spatial Gene Expression to evaluate the transcriptional profile associated with NKX6-2 that was observed in the human IPMN samples.
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| Overall design |
Samples were collected from mice at 15 and 25 weeks post doxycycline treatment and were flash frozen. The samples were then cryosectioned and analyzed with the Visium Spatial Gene Expression platform from 10x genomics.
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| Contributor(s) |
Sans M, Rajapakshe KI, Makino Y, Min J, Guerrero PA, Maitra A |
| Citation(s) |
37285225 |
| |
| Submission date |
May 24, 2023 |
| Last update date |
Sep 06, 2023 |
| Contact name |
Anirban Maitra |
| E-mail(s) |
AMaitra@mdanderson.org
|
| Organization name |
The University of Texas MD Anderson Cancer Center
|
| Department |
Translational Molecular Pathology
|
| Lab |
Maitra laboratory
|
| Street address |
6565 MD Anderson Blvd
|
| City |
Houston |
| State/province |
TX |
| ZIP/Postal code |
77030 |
| Country |
USA |
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| Platforms (1) |
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| Samples (2) |
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| This SubSeries is part of SuperSeries: |
| GSE233254 |
Spatial Transcriptomics of Intraductal Papillary Mucinous Neoplasms of The Pancreas Identifies NKX6-2 Expression as a Driver of Gastric Differentiation and Indolent Biological Potential |
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| Relations |
| BioProject |
PRJNA975858 |
