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Series GSE234331 Query DataSets for GSE234331
Status Public on Jun 07, 2023
Title PU.1 and BCL11B sequentially cooperate with RUNX1 to anchor mSWI/SNF to poise the T cell effector landscape
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
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NIH grant(s)
Grant ID Grant title Affiliation Name
R35 GM138150 Epigenesis of Cell Fate Potential UNIVERSITY OF CHICAGO Andrew S Koh
BioProject PRJNA971212
Submission date Jun 06, 2023
Last update date Mar 13, 2024
Contact name Alexandra Bradu
E-mail(s) abradu@uchicago.edu
Organization name University Of Chicago
Department Pathology
Lab Koh Lab
Street address 924 East 57th Street
City Chicago
State/province IL
ZIP/Postal code 60637
Country USA
 
Platforms (2)
GPL19057 Illumina NextSeq 500 (Mus musculus)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (104)
GSM7465184 DN1 thymocytes, rep 1
GSM7465185 DN1 thymocytes, rep 2
GSM7465186 DN2a thymocytes, rep 1
This SuperSeries is composed of the following SubSeries:
GSE234329 PU.1 and BCL11B sequentially cooperate with RUNX1 to anchor mSWI/SNF to poise the T cell effector landscape [ATAC-seq]
GSE234330 PU.1 and BCL11B sequentially cooperate with RUNX1 to anchor mSWI/SNF to poise the T cell effector landscape [CUT&RUN]
GSE248159 PU.1 and BCL11B sequentially cooperate with RUNX1 to anchor mSWI/SNF to poise the T cell effector landscape [RNA-seq]

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE234331_RAW.tar 2.6 Gb (http)(custom) TAR (of BW)
SRA Run SelectorHelp

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