NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE235143 Query DataSets for GSE235143
Status Public on Oct 05, 2023
Title Gene expression profile at single cell level of mononuclear cells from skeletal muscle (gastrocnemius) of non-PAD controls and PAD patients
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary The molecular and cellular mechanisms of skeletal muscle from peripheral artery disease (PAD) patients are not completely understood. We used single cell RNA sequencing (scRNA-seq) to characterize the skeletal muscle diversity between control and PAD patients.
 
Overall design Live mononuclear cells (Calcein+) from human skeletal muscle were isolated by Fluorescence-activated cell sorting (FACS) and analyzed using scRNAseq.
Web link https://www.biorxiv.org/content/10.1101/2023.06.21.545899v1
 
Contributor(s) Turiel G, Desgeorges T, Masschelein E, Zhang J, Engelberger S, De Bock K
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jun 16, 2023
Last update date Oct 06, 2023
Contact name Genome Informatics
E-mail(s) fgcz.gi@gmail.com
Organization name ETH ZURICH / University of Zurich
Department Functional Genomics Center Zurich (FGCZ)
Street address Winterthurerstrasse 190
City Zurich
ZIP/Postal code 8057
Country Switzerland
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (13)
GSM7495917 Control_1
GSM7495918 PAD_1.1
GSM7495919 PAD_1.2
Relations
BioProject PRJNA984664

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE235143_RAW.tar 996.8 Mb (http)(custom) TAR (of MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap