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Series GSE235485 Query DataSets for GSE235485
Status Public on Jun 22, 2023
Title Human HFF cells large rearrangements detection after CRISPR-Cas9 nuclease (Fig. 3d)
Organism Homo sapiens
Experiment type Genome variation profiling by genome tiling array
Genome variation profiling by SNP array
Summary SORSC1 gene editing by CRISPR-Cas9 nuclease in heterozygous HFF for UROS inactivation. Fluorescent positive cell sorting for UROS and large rearrangements confirmation in chromosome 10q.
 
Overall design Three-condition experiment, HFF vs Agilent control DNA, Two Fluorescent-positive clones after SORSC1 gene editing and bulk before editing
 
Contributor(s) Boutin J, Pennamen P
Citation(s) 37429857
Submission date Jun 21, 2023
Last update date Sep 12, 2023
Contact name Julian Boutin
E-mail(s) julian.boutin@u-bordeaux.fr
Organization name INSERM U1312 BRIC
Lab BioGO team 8
Street address 146 rue Leo Saignat
City Bordeaux
State/province Nouvelle Aquitaine
ZIP/Postal code 33000
Country France
 
Platforms (1)
GPL33494 Agilent-085591 Human 180K CGH+SNP
Samples (3)
GSM7503631 HFF SORSC1 transfected CGH bulk before editing
GSM7503632 HFF SORSC1 transfected CGH clone 3
GSM7503633 HFF SORSC1 transfected CGH clone 4
Relations
BioProject PRJNA986142

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE235485_3d.xlsx 494.6 Kb (ftp)(http) XLSX
GSE235485_RAW.tar 55.0 Mb (http)(custom) TAR (of TXT)
Processed data are available on Series record

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