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Series GSE236667 Query DataSets for GSE236667
Status Public on Aug 28, 2023
Title Thymic mimetic cells function beyond self-tolerance [scATAC-Seq Multiome]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary Deliniating thymic epithelial cell heterogeneity by combined single cell RNAseq and ATACseq
Overall design 10x single cell multiome scATACseq profiles of thymic epithelial cells from four pooled EpCAM enriched stroma of 5 week old B6.Adig mice.
Contributor(s) Abramson J, Goldfarb Y, Givony T
Citation(s) 37674082
Submission date Jul 06, 2023
Last update date Nov 27, 2023
Contact name Jakub Abramson
Organization name Weizmann Institute of Science
Department Department of Immunology
Street address 234 Herzl st.
City Rehovot
ZIP/Postal code 7610001
Country Israel
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (2)
GSM7567337 AireWT_GEX
GSM7567338 AireWT_ATAC
This SubSeries is part of SuperSeries:
GSE236075 Thymic mimetic cells function beyond self-tolerance
BioProject PRJNA991998

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE236667_RAW.tar 2.9 Gb (http)(custom) TAR (of MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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