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Series GSE236669 Query DataSets for GSE236669
Status Public on Aug 28, 2023
Title Thymic mimetic cells function beyond self-tolerance [scRNA-Seq Spib chimeras]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Deliniating the antigen-presenting compartment of thymic Spib–/– and Spib+/– chimeric mice
Overall design 10x single cell RNAseq profiles of thymic CD45.1+ CD3– (CD4/CD8DP)–MHCIImid-high cells from perfused Spib–/– and Spib+/– chimeric mice
Contributor(s) Abramson J, Goldfarb Y, Givony T
Citation(s) 37674082
Submission date Jul 06, 2023
Last update date Nov 27, 2023
Contact name Jakub Abramson
Organization name Weizmann Institute of Science
Department Department of Immunology
Street address 234 Herzl st.
City Rehovot
ZIP/Postal code 7610001
Country Israel
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (4)
GSM7567343 SpiB replicate1
GSM7567344 SpiB replicate2
GSM7567345 HTO library for SpiB replicate1
This SubSeries is part of SuperSeries:
GSE236075 Thymic mimetic cells function beyond self-tolerance
BioProject PRJNA991997

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE236669_RAW.tar 133.2 Mb (http)(custom) TAR (of MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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