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Series GSE237051 Query DataSets for GSE237051
Status Public on Oct 25, 2023
Title Cohesin and CTCF do not assemble TADs in Xenopus sperm and male pronuclei
Organisms Xenopus laevis; Homo sapiens; Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Other
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 38129077
Submission date Jul 11, 2023
Last update date Jan 24, 2024
Contact name Roman R Stocsits
E-mail(s) roman.stocsits@imp.ac.at
Organization name IMP - Research Institute of Molecular Pathology
Lab Jan-Michael Peters' Lab
Street address Campus-Vienna-Biocenter 1
City Vienna
ZIP/Postal code 1030
Country Austria
 
Platforms (5)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
GPL18936 Illumina HiSeq 2500 (Xenopus laevis)
Samples (28)
GSM7593923 Pronuclei 140min, +123nM CTCF, CTCF ChIP-Seq
GSM7593924 Pronuclei 140min, +50nM CTCF, CTCF ChIP-Seq
GSM7593925 mouse embryonic fibroblasts, Smc3 ChIP-Seq, replicate 1
This SuperSeries is composed of the following SubSeries:
GSE237049 Cohesin and CTCF do not assemble TADs in Xenopus sperm and male pronuclei
GSE237050 Cohesin and CTCF do not assemble TADs in Xenopus sperm and male pronuclei
Relations
BioProject PRJNA993630

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE237051_RAW.tar 14.8 Gb (http)(custom) TAR (of BED, BEDGRAPH, HIC)
SRA Run SelectorHelp

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