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Series GSE239334 Query DataSets for GSE239334
Status Public on Oct 02, 2023
Title Transcriptome analysis of high potent DCs using small molecule compounds
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Comparative gene expression analysis of generated DCs on several condition with small molecule compounds
Overall design Total RNA extracted from generated DCs on several conditon with small molecule compounds were used for library construction with NEB Next Ultra II Directional RNA Library Prep Kit. All libraries were sequenced (2x75 bp) usng Illumina NextSeq 500.
Contributor(s) Ura H, Niida Y, Onai N, Matsuba S
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Submission date Jul 26, 2023
Last update date Oct 02, 2023
Contact name Hiroki Ura
Organization name Kanazawa Medical University Hospital
Lab Center for Clinical Genomics
Street address 1-1 Daigaku
City Uchinada
State/province Ishikawa
ZIP/Postal code 920-0293
Country Japan
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (18)
GSM7663253 Lineage (-) day0
GSM7663254 Lineage (-) day0_2
GSM7663255 Day3-DMSO, CD11c+I-AI-Ehigh cells day3
BioProject PRJNA998841

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE239334_RAW.tar 10.1 Mb (http)(custom) TAR (of TSV)
GSE239334_gene_tpms_all_samples.tsv.gz 1.2 Mb (ftp)(http) TSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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