|
| Status |
Public on Oct 02, 2023 |
| Title |
Transcriptome analysis of high potent DCs using small molecule compounds |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Comparative gene expression analysis of generated DCs on several condition with small molecule compounds
|
| |
|
| Overall design |
Total RNA extracted from generated DCs on several conditon with small molecule compounds were used for library construction with NEB Next Ultra II Directional RNA Library Prep Kit. All libraries were sequenced (2x75 bp) usng Illumina NextSeq 500.
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| |
|
| Contributor(s) |
Ura H, Niida Y, Onai N, Matsuba S |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Jul 26, 2023 |
| Last update date |
Oct 02, 2023 |
| Contact name |
Hiroki Ura |
| E-mail(s) |
h-ura@kanazawa-med.ac.jp
|
| Organization name |
Kanazawa Medical University Hospital
|
| Lab |
Center for Clinical Genomics
|
| Street address |
1-1 Daigaku
|
| City |
Uchinada |
| State/province |
Ishikawa |
| ZIP/Postal code |
920-0293 |
| Country |
Japan |
| |
|
| Platforms (1) |
| GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
|
| Samples (18)
|
| GSM7663256 |
Day3-DMSO, CD11c+I-AI-Ehigh cells day3_2 |
| GSM7663257 |
Day3-YPPP, CD11c+I-AI-Ehigh cells day3_YPPP |
| GSM7663258 |
Day3-YPPP, CD11c+I-AI-Ehigh cells day3_YPPP_2 |
| GSM7663259 |
Day6-DMSO, CD11c+I-AI-Ehigh cells day6 |
| GSM7663260 |
Day6-DMSO, CD11c+I-AI-Ehigh cells day6_2 |
| GSM7663261 |
Day6-YPPP, CD11c+I-AI-Ehigh cells day6_YPPP |
| GSM7663262 |
Day6-YPPP, CD11c+I-AI-Ehigh cells day6_YPPP_2 |
| GSM7663263 |
Day3-DMSO, CD11c+I-AI-Eint cells day3_Mac_1 |
| GSM7663264 |
Day3-DMSO, CD11c+I-AI-Eint cells day3_Mac_2 |
| GSM7663265 |
Day3-YPPP, CD11c+I-AI-Eint cells day3_Mac_YPPP_1 |
| GSM7663266 |
Day3-YPPP, CD11c+I-AI-Eint cells day3_Mac_YPPP_2 |
| GSM7663267 |
Day6-DMSO, CD11c+I-AI-Eint cells day6_Mac_1 |
| GSM7663268 |
Day6-DMSO, CD11c+I-AI-Eint cells day6_Mac_2 |
| GSM7663269 |
Day6-YPPP, CD11c+I-AI-Eint cells day6_Mac_YPPP_1 |
| GSM7663270 |
Day6-YPPP, CD11c+I-AI-Eint cells day6_Mac_YPPP_2 |
|
| Relations |
| BioProject |
PRJNA998841 |
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