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Series GSE240529 Query DataSets for GSE240529
Status Public on Aug 10, 2024
Title The TLR8 agonist Selgantolimod regulates Kupffer cell differentiation status and indirectly impairs HBV entry into hepatocytes via an IL-6-dependent mechanism (PHH) [Liver]
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Background & Aims: In spite of universal vaccination programs, HBV remains a global burden due to the limited therapeutic options available. Therefore, achieving the goal of HBV cure will require a continuous effort to develop novel molecules and combination therapies. In this context, the Toll-like receptor 8 (TLR8) agonist selgantolimod (SLGN) has shown promising results during its clinical evaluation. Although the effect of SLGN has been explored in the peripheral immune compartment, little is known regarding its intrahepatic response. Therefore, we characterized the transcriptomic changes and intercellular communication events associated with SLGN in the liver microenvironment. Approach & Results: The analysis of single-cell RNA sequencing (scRNA-seq) data allowed us to identify that hepatic TLR8 expression takes place in the myeloid compartment. Therefore, we stablished a method for the isolation of human Kupffer cells (KCs). We found that in vitro treatment of KCs with SLGN induces the upregulation of monocyte markers (e.g., EREG, S100A12) and the downregulation of genes associated with the KC identity (e.g., SPIC, FOLR2). Moreover, treatment of hepatocytes with SLGN-conditioned media (CM) led to the downregulation of NTCP and impaired HBV entry. Finally, co-treatment with SLGN-CM and an IL-6-inhibitory antibody identified this cytokine as mediating the reduced HBV entry. Conclusions: Our results suggest that in addition to its previously described therapeutic activity against HBV, SLGN also presents a prophylactic effect. Furthermore, our characterization of SLGN sheds light into the transcriptional programs regulating KC activation and underscores the importance of considering cell states when annotating cell populations based on scRNA-seq data.
 
Overall design RNA-seq profiles from primary human hepatocytes (PHH) exposed (72 h) to selgantolimod-conditioned media (SLGN-CM, n=3) or Mock-CM (n=3) produced in KCs.
 
Contributor(s) Andres A, Suarez R, Grand X
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Aug 10, 2023
Last update date Aug 10, 2024
Contact name Xavier Grand
E-mail(s) xavier.grand@ens-lyon.fr, xavier.grand@inserm.fr
Phone +33611221960
Organization name INSERM U1052, UCBL1, ENS de Lyon
Lab U1052, LBMC
Street address 46 allée d'Italie
City Lyon
ZIP/Postal code 69364
Country France
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (6)
GSM7699423 Mock-CM-1
GSM7699424 SLGN-CM-1
GSM7699425 Mock-CM-2
This SubSeries is part of SuperSeries:
GSE240530 The TLR8 agonist Selgantolimod regulates Kupffer cell differentiation status and indirectly impairs HBV entry into hepatocytes via an IL-6-dependent mechanism (PHH)
Relations
BioProject PRJNA1004185

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Supplementary file Size Download File type/resource
GSE240529_PHH_SLGN_article-Normalized-counts.xlsx 1.1 Mb (ftp)(http) XLSX
GSE240529_PHH_normalized_counts.csv.gz 740.5 Kb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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