GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Series GSE241537 Query DataSets for GSE241537
Status Public on Oct 03, 2023
Title RNA-seq of female gonads isolated from juvenile eif4e1b mutant and wild-type zebrafish
Organism Danio rerio
Experiment type Expression profiling by high throughput sequencing
Summary The mRNA cap-binding protein eIF4E1b is critical for female germline development in zebrafish. To study the effect of eIF4E1b loss in zebrafish, we isolated gonads with a high expression of ziwi:GFP (female germline marker) from wild-type and eif4e1b mutant juveniles and performed RNA-seq.
Overall design We performed differential expression gene analyses of wild-type and eif4e1b mutant gonads (n = 3 biological replicates containing 3 gonads each)
Contributor(s) Lorenzo-Orts L, Strobl M, Pauli A
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Aug 23, 2023
Last update date Oct 04, 2023
Contact name Marcus Strobl
Organization name IMP
Street address Campus Vienna Biocenter 1
City Vienna
ZIP/Postal code 1030
Country Austria
Platforms (1)
GPL24995 Illumina NovaSeq 6000 (Danio rerio)
Samples (6)
GSM7730277 Gonad WT 1
GSM7730278 Gonad WT 2
GSM7730279 Gonad WT 3
BioProject PRJNA1008624

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE241537_RAW.tar 800.0 Kb (http)(custom) TAR (of TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap