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| Status |
Public on Oct 03, 2023 |
| Title |
RNA-seq of female gonads isolated from juvenile eif4e1b mutant and wild-type zebrafish |
| Organism |
Danio rerio |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
The mRNA cap-binding protein eIF4E1b is critical for female germline development in zebrafish. To study the effect of eIF4E1b loss in zebrafish, we isolated gonads with a high expression of ziwi:GFP (female germline marker) from wild-type and eif4e1b mutant juveniles and performed RNA-seq.
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| Overall design |
We performed differential expression gene analyses of wild-type and eif4e1b mutant gonads (n = 3 biological replicates containing 3 gonads each)
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| Contributor(s) |
Lorenzo-Orts L, Strobl M, Pauli A |
| Citation missing |
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| Submission date |
Aug 23, 2023 |
| Last update date |
Oct 04, 2023 |
| Contact name |
Marcus Strobl |
| Organization name |
IMP
|
| Street address |
Campus Vienna Biocenter 1
|
| City |
Vienna |
| ZIP/Postal code |
1030 |
| Country |
Austria |
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| Platforms (1) |
| GPL24995 |
Illumina NovaSeq 6000 (Danio rerio) |
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| Samples (6)
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| Relations |
| BioProject |
PRJNA1008624 |
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