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Series GSE241537 Query DataSets for GSE241537
Status Public on Oct 03, 2023
Title RNA-seq of female gonads isolated from juvenile eif4e1b mutant and wild-type zebrafish
Organism Danio rerio
Experiment type Expression profiling by high throughput sequencing
Summary The mRNA cap-binding protein eIF4E1b is critical for female germline development in zebrafish. To study the effect of eIF4E1b loss in zebrafish, we isolated gonads with a high expression of ziwi:GFP (female germline marker) from wild-type and eif4e1b mutant juveniles and performed RNA-seq.
Overall design We performed differential expression gene analyses of wild-type and eif4e1b mutant gonads (n = 3 biological replicates containing 3 gonads each)
Contributor(s) Lorenzo-Orts L, Strobl M, Pauli A
Citation(s) 38177902
Submission date Aug 23, 2023
Last update date Mar 06, 2024
Contact name Marcus Strobl
Organization name IMP
Street address Campus Vienna Biocenter 1
City Vienna
ZIP/Postal code 1030
Country Austria
Platforms (1)
GPL24995 Illumina NovaSeq 6000 (Danio rerio)
Samples (6)
GSM7730277 Gonad WT 1
GSM7730278 Gonad WT 2
GSM7730279 Gonad WT 3
BioProject PRJNA1008624

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Supplementary file Size Download File type/resource
GSE241537_RAW.tar 800.0 Kb (http)(custom) TAR (of TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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