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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Sep 20, 2023 |
| Title |
Imaging and multi-omics datasets converge to define different neural progenitor origins for ATRT-SHH subgroups |
| Organisms |
Homo sapiens; Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
Third-party reanalysis
Methylation profiling by genome tiling array
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| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| Overall design |
Refer to individual Series
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| Citation(s) |
37863903 |
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| Submission date |
Aug 31, 2023 |
| Last update date |
Nov 09, 2023 |
| Contact name |
Mamy Jean de Dieu ANDRIANTERANAGNA |
| E-mail(s) |
mamy-jean-de-dieu.andrianteranagna@curie.fr
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| Phone |
+33156246274
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| Organization name |
Institut Curie
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| Department |
Centre de Recherche
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| Lab |
U900
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| Street address |
26 rue d'Ulm
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| City |
Paris |
| State/province |
Ile de France |
| ZIP/Postal code |
75005 |
| Country |
France |
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| Platforms (4)
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| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
| GPL21145 |
Infinium MethylationEPIC |
| GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
| GPL24676 |
Illumina NovaSeq 6000 (Homo sapiens) |
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| Samples (69)
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| GSM7734605 |
CHLA-02, DAPT, replicate 1 |
| GSM7734606 |
CHLA-02, DAPT, replicate 2 |
| GSM7734607 |
CHLA-02, DAPT, replicate 3 |
| GSM7734608 |
IC-032, DMSO, replicate 1 |
| GSM7734609 |
IC-032, DMSO, replicate 2 |
| GSM7734610 |
IC-032, DMSO, replicate 3 |
| GSM7734611 |
IC-032, DAPT, replicate 1 |
| GSM7734612 |
IC-032, DAPT, replicate 2 |
| GSM7734613 |
IC-032, DAPT, replicate 3 |
| GSM7734614 |
mouse, primary RT, 29048 |
| GSM7734615 |
mouse, primary RT, 38594A |
| GSM7734616 |
mouse, primary RT, 43825B |
| GSM7734617 |
mouse, primary RT, 43987A |
| GSM7734618 |
mouse, primary RT, 43989C |
| GSM7734619 |
mouse, primary RT, 43990A |
| GSM7734620 |
mouse, primary RT, 43992A |
| GSM7734621 |
mouse, primary RT, 43998A |
| GSM7734622 |
mouse, primary RT, 29050A |
| GSM7734623 |
mouse, primary RT, 29941C |
| GSM7734624 |
mouse, primary RT, 29225D |
| GSM7734625 |
mouse, primary RT, R26P98 |
| GSM7734626 |
mouse, primary RT, R26P170 |
| GSM7734627 |
mouse, primary RT, R26P123 |
| GSM7734628 |
mouse, primary RT, R26P87 |
| GSM7734629 |
mouse, primary RT, R26P115 |
| GSM7734654 |
mouse RT, R26-SHH, R26P26 |
| GSM7734655 |
mouse RT, R26-SHH, R26P27 |
| GSM7734656 |
mouse RT, R26-SHH, R26P87 |
| GSM7734657 |
ATRT, CAL-SHH, scRNAseq, ATRT40 |
| GSM7734658 |
ATRT, CAL-SHH, scRNAseq, ATRT41 |
| GSM7734659 |
ATRT, CAL-SHH, scRNAseq, ATRT50 |
| GSM7734660 |
ATRT, CAL-SHH, scRNAseq, ATRT61 |
| GSM7744257 |
primary ATRT, ATRT01 |
| GSM7744258 |
primary ATRT, ATRT28 |
| GSM7744259 |
primary ATRT, ATRT31 |
| GSM7744260 |
primary ATRT, ATRT36 |
| GSM7744261 |
primary ATRT, ATRT37 |
| GSM7744262 |
primary ATRT, ATRT38 |
| GSM7744263 |
primary ATRT, ATRT45 |
| GSM7744264 |
primary ATRT, ATRT46 |
| GSM7744265 |
primary ATRT, ATRT49 |
| GSM7744266 |
primary ATRT, ATRT60 |
| GSM7748935 |
primary ATRT, ATRT02 |
| GSM7748936 |
primary ATRT, ATRT03 |
| GSM7748937 |
primary ATRT, ATRT04 |
| GSM7748938 |
primary ATRT, ATRT05 |
| GSM7748939 |
primary ATRT, ATRT12 |
| GSM7748940 |
primary ATRT, ATRT14 |
| GSM7748941 |
primary ATRT, ATRT16 |
| GSM7748942 |
primary ATRT, ATRT18 |
| GSM7748943 |
primary ATRT, ATRT19 |
| GSM7748944 |
primary ATRT, ATRT20 |
| GSM7748945 |
primary ATRT, ATRT21 |
| GSM7748946 |
primary ATRT, ATRT22 |
| GSM7748947 |
primary ATRT, ATRT23 |
| GSM7748948 |
primary ATRT, ATRT24 |
| GSM7748949 |
primary ATRT, ATRT26 |
| GSM7748950 |
primary ATRT, ATRT27 |
| GSM7748951 |
primary ATRT, ATRT28 |
| GSM7748952 |
primary ATRT, ATRT29 |
| GSM7748953 |
primary ATRT, ATRT43 |
| GSM7748954 |
primary ATRT, ATRT45 |
| GSM7748955 |
primary ATRT, ATRT46 |
| GSM7748956 |
primary ATRT, ATRT47 |
| GSM7748957 |
primary ATRT, ATRT48 |
| GSM7748958 |
primary ATRT, ATRT51 |
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| This SuperSeries is composed of the following SubSeries:
|
| GSE241733 |
Imaging and multi-omics datasets converge to define different neural progenitor origins for ATRT-SHH subgroups [bulkRNAseq_ATRT_cellLines] |
| GSE241734 |
Imaging and multi-omics datasets converge to define different neural progenitor origins for ATRT-SHH subgroups [bulkRNAseq_mouseRT_R26] |
| GSE241736 |
Imaging and multi-omics datasets converge to define different neural progenitor origins for ATRT-SHH subgroups [scRNAseq_mouseRT_R26SHH] |
| GSE241737 |
Imaging and multi-omics datasets converge to define different neural progenitor origins for ATRT-SHH subgroups [scRNAseq_ATRT_CAL] |
| GSE241831 |
Imaging and multi-omics datasets converge to define different neural progenitor origins for ATRT-SHH subgroups [bulkRNAseq_primaryATRT] |
| GSE242089 |
Imaging and multi-omics datasets converge to define different neural progenitor origins for ATRT-SHH subgroups [DNAmeth_EPICarray] |
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| Relations |
| BioProject |
PRJNA1011311 |
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