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GEO accession:
Series GSE242306
Query DataSets for GSE242306
Status
Public on Sep 06, 2023
Title
mouse thymocytes
Organism
Mus musculus
Experiment type
Expression profiling by high throughput sequencing
Other
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
38783381
Submission date
Sep 05, 2023
Last update date
Sep 11, 2024
Contact name
Andreas Krueger
E-mail(s)
andreas.krueger@immu.bio.uni-giessen.de
Organization name
Justus Liebig University
Lab
Molecular Immunology
Street address
Schubertstr. 81
City
Gießen
ZIP/Postal code
35392
Country
Germany
Platforms (1)
GPL19057
Illumina NextSeq 500 (Mus musculus)
Samples (30)
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GSM7745444
miR-eCLIP Ago2IP sample1
GSM7745445
miR-eCLIP Ago2IP sample2
GSM7745446
miR-eCLIP Ago2IP sample3
GSM7745447
miR-eCLIP Ago2IP with miR181a/b-1-KO sample1
GSM7745448
miR-eCLIP Ago2IP with miR181a/b-1-KO sample2
GSM7745449
miR-eCLIP Ago2IP with miR181a/b-1-KO sample3
GSM7745450
miR-eCLIP_InputControl_Ago2IP_s1
GSM7745451
miR-eCLIP_InputControl_Ago2IP_s2
GSM7745452
miR-eCLIP_InputControl_Ago2IP_s3
GSM7745453
miR-eCLIP_InputControl_Ago2IP_miR181KO_s1
GSM7745454
miR-eCLIP_InputControl_Ago2IP_miR181KO_s2
GSM7745455
miR-eCLIP_InputControl_Ago2IP_miR181KO_s3
GSM7745456
miR-eCLIP miR181-enriched sample1
GSM7745457
miR-eCLIP miR181-enriched sample2
GSM7745458
miR-eCLIP miR181-enriched sample3
GSM7745459
miR-eCLIP miR181-enriched with miR181a/b-1-KO sample1
GSM7745460
miR-eCLIP miR181-enriched with miR181a/b-1-KO sample2
GSM7745461
miR-eCLIP miR181-enriched with miR181a/b-1-KO sample3
GSM7757939
RNAseq WT 1
GSM7757940
RNAseq WT 2
GSM7757941
RNAseq WT 3
GSM7757942
RNAseq KO 1
GSM7757943
RNAseq KO 2
GSM7757944
RNAseq KO 3
GSM7757945
Ribo footprint WT 1
GSM7757946
Ribo footprint WT 2
GSM7757947
Ribo footprint WT 3
GSM7757948
Ribo footprint KO 1
GSM7757949
Ribo footprint KO 2
GSM7757950
Ribo footprint KO 3
This SuperSeries is composed of the following SubSeries:
GSE241905
miR-eCLIP of miR181-5p in mouse thymocytes.
GSE242304
A high-resolution map of functional miR-181 target sites in the thymus reveals the role of coding sequence targeting and alternative seed binding
Relations
BioProject
PRJNA1013063
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE242306_RAW.tar
230.9 Mb
(http)
(custom)
TAR (of BED, BW)
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