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Series GSE243184 Query DataSets for GSE243184
Status Public on Apr 15, 2024
Title ETS1, a target gene of the EWSR1::FLI1 fusion oncoprotein, regulates the expression of the focal adhesion protein TENSIN3
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
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NIH grant(s)
Grant ID Grant title Affiliation Name
ZIA BC011704 Discovery of genes required for expression or activity of fusion oncogenes National Cancer Institute - Division of Basic Sciences Natasha Caplen
Submission date Sep 14, 2023
Last update date Apr 16, 2024
Contact name Natasha J Caplen
Organization name National Institutes of Health
Department National Cancer Institute
Lab Functional Genetics
Street address 37 Convent Drive, Bldg. 37, Rm 6128
City Bethesda
State/province Maryland
ZIP/Postal code 20892
Country USA
 
Platforms (1)
GPL30173 NextSeq 2000 (Homo sapiens)
Samples (63)
GSM7780176 TC-32 siNEG, Input, rep 1
GSM7780177 TC-32 siNEG, Input, rep 2
GSM7780178 TC-32 siNEG, ETS1, rep 1
This SuperSeries is composed of the following SubSeries:
GSE243171 EWSR1::FLI1 fusion oncoproteins’ regulation of ETS1 (ChIP-seq)
GSE243183 EWSR1::FLI1 fusion oncoproteins’ regulation of ETS1 (RNA-seq)
GSE243277 EWSR1::FLI1 fusion oncoproteins’ regulation of ETS1 (CUT&RUN)
Relations
BioProject PRJNA1017350

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE243184_RAW.tar 1.8 Gb (http)(custom) TAR (of BED, BIGWIG, NARROWPEAK)
SRA Run SelectorHelp

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