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Series GSE24502 Query DataSets for GSE24502
Status Public on Nov 26, 2012
Title Genome wide DNA methylation analysis in NSCLC
Organism Homo sapiens
Experiment type Methylation profiling by genome tiling array
Summary DNA methylation is an important mechanism for gene silencing in lung cancer. In this study we identified a large number of tumor specifically methylated genes in NSCLC patients by methylome profiling.
 
Overall design Genomic DNA was extracted from tumor and matching non-malignant lung tissue samples from 101 NSCLC patients and genome wide DNA methylation was analyzed using the MeDIP-chip technology as described previously (Weber et al., 2005).
Genomic DNA was extracted from NSCLC cell lines and genome wide DNA methylation was analyzed using the MeDIP-chip technology as described previously (Weber et al., 2005).
 
Contributor(s) Zöchbauer-Müller S, Heller G
Citation(s) 23172663
Submission date Oct 04, 2010
Last update date Jul 10, 2024
Contact name Gerwin Heller
E-mail(s) gerwin.heller@meduniwien.ac.at
Organization name Medical University of Vienna
Department Medicine I
Street address Währinger Gürtel 18-20
City Wien
ZIP/Postal code 1090
Country Austria
 
Platforms (1)
GPL11013 NimbleGen Human Meth 385K Prom Plus CpG Array [2006-11-02_HG18_CpG_Promo].
Samples (205)
GSM603254 Normal1
GSM603255 Normal10
GSM603256 Normal100
This SubSeries is part of SuperSeries:
GSE32497 GENOME-WIDE CpG ISLAND METHYLATION ANALYSIS IN NON-SMALL CELL LUNG CANCER PATIENTS
Relations
BioProject PRJNA153909

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE24502_RAW.tar 4.6 Gb (http)(custom) TAR (of GFF, PAIR)
Processed data provided as supplementary file
Processed data included within Sample table

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