NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE246062 Query DataSets for GSE246062
Status Public on Mar 12, 2024
Title Shared and distinct interactions of Epstein-Barr Nuclear Antigen 2 type 1 and type 2 with the human genome
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 38475709
NIH grant(s)
Grant ID Grant title Affiliation Name
R01 AI148276 Genomics of Inflammatory Bowel Disease CHILDREN'S HOSPITAL MEDICAL CENTER Leah Claire Kottyan
U01 HG011172 Polygenic Risk Scores for Healthier African American Families CHILDREN'S HOSPITAL MEDICAL CENTER Leah Claire Kottyan
U19 AI070235 Epithelial Genes in Allergic Inflammation CHILDREN'S HOSPITAL MEDICAL CENTER Gurjit K. Khurana Hershey
P30 AR070549 Cincinnati Rheumatic Diseases Resource Center CHILDREN'S HOSPITAL MEDICAL CENTER Leah Claire Kottyan
R01 HG010730 Virus-driven human gene misregulation in disease CHILDREN'S HOSPITAL MEDICAL CENTER Matthew Tyson Weirauch
R01 GM055479 Biochemical and Computational Analysis of Notch signal transduction CHILDREN'S HOSPITAL MEDICAL CENTER Matthew Tyson Weirauch
U01 AI130830 Gene Regulation as a Foundation for Autoimmune Disease Prevention CHILDREN'S HOSPITAL MEDICAL CENTER Matthew Tyson Weirauch
R01 AR073228 Transcription Factor Genetics in Lupus CHILDREN'S HOSPITAL MEDICAL CENTER Leah Claire Kottyan
R01 AR073228 Transcription Factor Genetics in Lupus CHILDREN'S HOSPITAL MEDICAL CENTER Matthew Tyson Weirauch
R01 NS099068 Binding of Epstein Barr Virus EBNA2 Unifies Multiple Sclerosis Genetic Mechanisms CHILDREN'S HOSPITAL MEDICAL CENTER Leah Claire Kottyan
R01 NS099068 Binding of Epstein Barr Virus EBNA2 Unifies Multiple Sclerosis Genetic Mechanisms CHILDREN'S HOSPITAL MEDICAL CENTER Matthew Tyson Weirauch
R01 AI024717 Genetic Linkage in Lupus CHILDREN'S HOSPITAL MEDICAL CENTER Leah Claire Kottyan
R01 AI024717 Genetic Linkage in Lupus CHILDREN'S HOSPITAL MEDICAL CENTER Matthew Tyson Weirauch
Submission date Oct 23, 2023
Last update date Mar 20, 2024
Contact name Matthew Weirauch
E-mail(s) Matthew.Weirauch@cchmc.org
Organization name Cincinnati Children's Hospital Medical Center
Department Center for Autoimmune Genomics and Etiology (CAGE)
Street address 3333 Burnet Avenue
City Cincinnati
State/province Ohio
ZIP/Postal code 45229-3026
Country USA
 
Platforms (2)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (43)
GSM7854721 ATAC-seq: AG876 Replicate 1
GSM7854722 ATAC-seq: AG876 Replicate 2
GSM7854723 ATAC-seq: Jiyoye Replicate 1
This SuperSeries is composed of the following SubSeries:
GSE246059 Shared and distinct interactions of Epstein-Barr Nuclear Antigen 2 type 1 and type 2 with the human genome (ATAC-Seq)
GSE246060 Shared and distinct interactions of Epstein-Barr Nuclear Antigen 2 type 1 and type 2 with the human genome (ChIP-Seq)
GSE246061 Shared and distinct interactions of Epstein-Barr Nuclear Antigen 2 type 1 and type 2 with the human genome (RNA-Seq)
Relations
BioProject PRJNA1031208

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE246062_RAW.tar 6.8 Gb (http)(custom) TAR (of BW, NARROWPEAK, SF)
SRA Run SelectorHelp

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap