GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Series GSE247144 Query DataSets for GSE247144
Status Public on Feb 22, 2024
Title Chronic stress causes metastasis via neutrophil-mediated changes to the microenvironment.
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary We report the mechanism linking chronic stress with increased cancer metastasis risk.
Overall design RNA-seq experiments in murine lung tissue or breast cancer tumors under chronic stress, and RNA-seq and ChIP-seq experiments in murine bone marrow isolated neutrophils treated with different glucocorticoid receptor agonists.
Contributor(s) Gao Y, He X, Egeblad M
Citation(s) 38402610
Submission date Nov 06, 2023
Last update date Mar 05, 2024
Contact name Yuan Gao
Phone 5075130882
Organization name CSHL
Street address One Bungtown Rd
City Cold Spring Harbor
State/province NY
ZIP/Postal code 11724
Country USA
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (25)
GSM7884187 whole lung_control_bio rep1
GSM7884188 whole lung_control_bio rep2
GSM7884189 whole lung_stress_bio rep1
BioProject PRJNA1036283

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE247144_DESeq2_DEX.tabular.txt.gz 817.4 Kb (ftp)(http) TXT
GSE247144_DESeq2_GSK.tabular.txt.gz 851.8 Kb (ftp)(http) TXT
GSE247144_DESeq2_lung_neutrophil_stress.tabular.txt.gz 927.0 Kb (ftp)(http) TXT
GSE247144_DESeq2_whole_lung_stress.tabular.txt.gz 1005.0 Kb (ftp)(http) TXT
GSE247144_DEseq2_primary_d35.tabular.txt.gz 697.5 Kb (ftp)(http) TXT
GSE247144_RAW.tar 701.9 Mb (http)(custom) TAR (of BIGWIG, TSV)
SRA Run SelectorHelp
Raw data are available in SRA

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap