NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE247144 Query DataSets for GSE247144
Status Public on Feb 22, 2024
Title Chronic stress causes metastasis via neutrophil-mediated changes to the microenvironment.
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary We report the mechanism linking chronic stress with increased cancer metastasis risk.
 
Overall design RNA-seq experiments in murine lung tissue or breast cancer tumors under chronic stress, and RNA-seq and ChIP-seq experiments in murine bone marrow isolated neutrophils treated with different glucocorticoid receptor agonists.
 
Contributor(s) Gao Y, He X, Egeblad M
Citation(s) 38402610
Submission date Nov 06, 2023
Last update date Mar 05, 2024
Contact name Yuan Gao
E-mail(s) yuangao.ustc@gmail.com
Phone 5075130882
Organization name CSHL
Street address One Bungtown Rd
City Cold Spring Harbor
State/province NY
ZIP/Postal code 11724
Country USA
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (25)
GSM7884187 whole lung_control_bio rep1
GSM7884188 whole lung_control_bio rep2
GSM7884189 whole lung_stress_bio rep1
Relations
BioProject PRJNA1036283

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE247144_DESeq2_DEX.tabular.txt.gz 817.4 Kb (ftp)(http) TXT
GSE247144_DESeq2_GSK.tabular.txt.gz 851.8 Kb (ftp)(http) TXT
GSE247144_DESeq2_lung_neutrophil_stress.tabular.txt.gz 927.0 Kb (ftp)(http) TXT
GSE247144_DESeq2_whole_lung_stress.tabular.txt.gz 1005.0 Kb (ftp)(http) TXT
GSE247144_DEseq2_primary_d35.tabular.txt.gz 697.5 Kb (ftp)(http) TXT
GSE247144_RAW.tar 701.9 Mb (http)(custom) TAR (of BIGWIG, TSV)
SRA Run SelectorHelp
Raw data are available in SRA

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap