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Series GSE247242 Query DataSets for GSE247242
Status Public on Jan 29, 2024
Title rna-seq snap33-1 vs wt -Description of Arabidopsis thaliana t-SNARE SNAP33
Organism Arabidopsis thaliana
Experiment type Expression profiling by high throughput sequencing
Summary ngs2021_03_snap33-rna-seq snap33-1 vs wt -What molecular pathways (transcripts) contribute to the phenotype of the snap33 loss-of-function mutant-comparing snap33 mutant to the WT out-segregating line in normal growth conditions at 5 and 12 days (before and after the appearance of the phenotype of the mutant snap33
 
Overall design 12 samples with 3 biological replicats. gene knock out,genotype comparison,time course
Web link http://tools.ips2.u-psud.fr/CATdb
 
Contributor(s) Caius J, Bigeard J, Henchiri H
Citation(s) 38281242
Submission date Nov 07, 2023
Last update date Feb 02, 2024
Contact name VĂ©ronique BRUNAUD
E-mail(s) veronique.brunaud@inrae.fr
Organization name INRA - CNRS - UPSUD
Lab IPS2
Street address rue Noetzlin
City Gif-sur-Yvette
ZIP/Postal code 91190
Country France
 
Platforms (1)
GPL19580 Illumina NextSeq 500 (Arabidopsis thaliana)
Samples (12)
GSM7885811 snap33_12d_1
GSM7885812 snap33_12d_2
GSM7885813 snap33_12d_3
Relations
BioProject PRJNA1036681

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE247242_RAW.tar 1.4 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA

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