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| Status |
Public on Nov 20, 2023 |
| Title |
Expression Data from Brucella abortus strain 2308 and isogenic mavR mutant cells |
| Organism |
Brucella abortus |
| Experiment type |
Expression profiling by array
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| Summary |
MavR is a 160 nucleotide regulatory RNA molecule that is produced during B. abortus strain 2308 growth in nutrient-replete broth.
We used custom-made Affymetrix B. abortus strain 2308 derived GeneChips to compare the gene expression properties of wild type and isogenic mavR mutant cells.
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| Overall design |
B. abortus strain 2308 or mavR mutant cells were grown to late exponential growth phase in brucella broth , total bacterial RNA was isolated and subjected to GeneChip hybridization and analysis. We sought to determine the regulatory effects of abcR1 and abcR2 RNA species.
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| Contributor(s) |
Dunman PM, Caswell C |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Nov 14, 2023 |
| Last update date |
Nov 20, 2023 |
| Contact name |
Paul M Dunman |
| E-mail(s) |
paul_dunman@urmc.rochester.edu
|
| Phone |
4029266510
|
| Organization name |
University of Rochester
|
| Street address |
695 W. Bloomfield Rd
|
| City |
Pittsford |
| State/province |
NY |
| ZIP/Postal code |
14534 |
| Country |
USA |
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| Platforms (1) |
| GPL15577 |
URMC_Dunman_Brucella_abortus_v1.0 |
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| Samples (6)
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| GSM7898648 |
Late exponential 2308, biological rep 1 |
| GSM7898649 |
Late exponential 2308, biological rep 2 |
| GSM7898650 |
Late exponential 2308, biological rep 3 |
| GSM7898651 |
Late exponential mavR, biological rep 1 |
| GSM7898652 |
Late exponential mavR, biological rep 2 |
| GSM7898653 |
Late exponential mavR, biological rep 3 |
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| Relations |
| BioProject |
PRJNA1040142 |
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