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Series GSE248300 Query DataSets for GSE248300
Status Public on Dec 01, 2023
Title Single-cell RNAseq analysis of CXCL12+ mesenchymal cells of the murine molar
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary A single cell transcriptional profile of mesenchymal cells in the murine molar marked by CXCL12-GFP, Col1a1-GFP or CXCL12-creER+ cells at postnatal day 6 or 25 (P6 or P25)
 
Overall design GFP+ or tdTomato+ were FACS-isolated . 10,000 cells were loaded onto 10X Genomic Chromium Single Cell Expression Solution version 3 platform. cDNA was sequenced by Illumina HiSeq4000 or NovaSeq 6000
 
Contributor(s) Ono N, Ono W
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Submission date Nov 20, 2023
Last update date Jan 06, 2024
Contact name Mizuki NAGATA
E-mail(s) Mizuki.Nagata@uth.tmc.edu
Phone 7134862658
Organization name UTHealth
Department Orthodontics
Lab Ono lab
Street address 7500 Cambridge St
City Houston
State/province TX
ZIP/Postal code 77054
Country USA
 
Platforms (2)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (3)
GSM7911151 Cxcl12-GFP P6
GSM7911152 Cxcl12-creER P6
GSM7911153 Col1a1-GFP_Cxcl12-creER P25
Relations
BioProject PRJNA1043187

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE248300_RAW.tar 150.7 Mb (http)(custom) TAR (of MTX, TSV)
GSE248300_mm10_trans_nono.fa.gz 769.1 Mb (ftp)(http) FA
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Raw data are available in SRA

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