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Series GSE248300 Query DataSets for GSE248300
Status Public on Dec 01, 2023
Title Single-cell RNAseq analysis of CXCL12+ mesenchymal cells of the murine molar
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary A single cell transcriptional profile of mesenchymal cells in the murine molar marked by CXCL12-GFP, Col1a1-GFP or CXCL12-creER+ cells at postnatal day 6 or 25 (P6 or P25)
Overall design GFP+ or tdTomato+ were FACS-isolated . 10,000 cells were loaded onto 10X Genomic Chromium Single Cell Expression Solution version 3 platform. cDNA was sequenced by Illumina HiSeq4000 or NovaSeq 6000
Contributor(s) Ono N, Ono W
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Submission date Nov 20, 2023
Last update date Jan 06, 2024
Contact name Mizuki NAGATA
Phone 7134862658
Organization name UTHealth
Department Orthodontics
Lab Ono lab
Street address 7500 Cambridge St
City Houston
State/province TX
ZIP/Postal code 77054
Country USA
Platforms (2)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (3)
GSM7911151 Cxcl12-GFP P6
GSM7911152 Cxcl12-creER P6
GSM7911153 Col1a1-GFP_Cxcl12-creER P25
BioProject PRJNA1043187

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE248300_RAW.tar 150.7 Mb (http)(custom) TAR (of MTX, TSV)
GSE248300_mm10_trans_nono.fa.gz 769.1 Mb (ftp)(http) FA
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Raw data are available in SRA

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