|
Status |
Public on May 17, 2011 |
Title |
h3k4me2_colxcvi-Analysis of epigenomic changes in hybrids Arabidopsis thaliana Col-0, C24 and Cvi accessions |
Organism |
Arabidopsis thaliana |
Experiment type |
Genome variation profiling by genome tiling array Genome binding/occupancy profiling by genome tiling array
|
Summary |
a2e_heterosis - h3k4me2_colxcvi - Arabidopsis thaliana accessions (Col-0, C24 and Cvi) and their hybrid were used to investigate the dynamics of the epigenome after intraspecific hybridization between - H3K4me2 profiling in ColxCvi hybrids
|
|
|
Overall design |
4 dye-swap - chip-chip
|
Web link |
http://urgv.evry.inra.fr/cgi-bin/projects/CATdb/consult_expce.pl?experiment_id=410
|
|
|
Contributor(s) |
Colot V, Roudier F, Martin-Magniette M |
Citation(s) |
21554454 |
|
Submission date |
Nov 01, 2010 |
Last update date |
Mar 22, 2012 |
Contact name |
François ROUDIER |
E-mail(s) |
francois.roudier@ens-lyon.fr
|
Organization name |
Ecole Normale Supérieure de Lyon
|
Department |
Biologie
|
Lab |
RDP
|
Street address |
46 Allée d'Italie
|
City |
Lyon |
ZIP/Postal code |
69364 |
Country |
France |
|
|
Platforms (2) |
GPL10919 |
Custom NimbleGen A. thaliana ChIP-chip tiling design AT7v1.1 |
GPL10920 |
Custom NimbleGen A. thaliana ChIP-chip tiling design AT7v1.2 |
|
Samples (8)
|
GSM615080 |
6303402COLCvi - H3K4me2_ColxCvi_I_INPUT vs H3K4me2_ColxCvi_I_IP |
GSM615081 |
14992002COLCvi - H3K4me2_ColxCvi_I_IP vs H3K4me2_ColxCvi_I_INPUT |
GSM615082 |
6302402COLCvi - H3K4me2_ColxCvi_I_INPUT vs H3K4me2_ColxCvi_I_IP |
GSM615083 |
16408402COLCvi - H3K4me2_ColxCvi_I_IP vs H3K4me2_ColxCvi_I_INPUT |
GSM615084 |
6302202COLCvi - H3K4me2_ColxCvi_II_INPUT vs H3K4me2_ColxCvi_II_IP |
GSM615085 |
16410302COLCvi - H3K4me2_ColxCvi_II_IP vs H3K4me2_ColxCvi_II_INPUT |
GSM615086 |
6302902COLCvi - H3K4me2_ColxCvi_II_INPUT vs H3K4me2_ColxCvi_II_IP |
GSM615087 |
16412502COLCvi - H3K4me2_ColxCvi_II_IP vs H3K4me2_ColxCvi_II_INPUT |
|
This SubSeries is part of SuperSeries: |
GSE24836 |
Analysis of epigenomic changes in hybrids Arabidopsis thaliana Col-0, C24 and Cvi accessions |
|
Relations |
BioProject |
PRJNA134559 |