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Series GSE256555 Query DataSets for GSE256555
Status Public on Feb 27, 2024
Title TF ChIP-seq from whole organism (ENCSR004RJS)
Project modENCODE
Organism Drosophila melanogaster
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ChIP-seq on transgenic flies expressing CG9876-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.

For data usage terms and conditions, please refer to and
Overall design
Citation(s) 22955616
BioProject PRJNA63463
Submission date Feb 24, 2024
Last update date Feb 27, 2024
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platforms (1)
GPL13304 Illumina HiSeq 2000 (Drosophila melanogaster)
Samples (2)
GSM8106142 TF ChIP-seq from whole organism (ENCLB211URW)
GSM8106143 TF ChIP-seq from whole organism (ENCLB245AOF)

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE256555_ENCFF084OPE_optimal_IDR_thresholded_peaks_dm3.bed.gz 47.5 Kb (ftp)(http) BED
GSE256555_ENCFF192QCJ_peaks_and_background_as_input_for_IDR_dm6.bed.gz 763.6 Kb (ftp)(http) BED
GSE256555_ENCFF255UHF_peaks_and_background_as_input_for_IDR_dm6.bigBed 1.3 Mb (ftp)(http) BIGBED
GSE256555_ENCFF317ATG_control_normalized_signal_dm6.bigWig 16.6 Mb (ftp)(http) BIGWIG
GSE256555_ENCFF343QGE_read-depth_normalized_signal_dm3.bigWig 14.8 Mb (ftp)(http) BIGWIG
GSE256555_ENCFF385BZX_read-depth_normalized_signal_dm6.bigWig 16.9 Mb (ftp)(http) BIGWIG
GSE256555_ENCFF598RCK_control_normalized_signal_dm3.bigWig 15.3 Mb (ftp)(http) BIGWIG
GSE256555_ENCFF675WCT_peaks_and_background_as_input_for_IDR_dm3.bed.gz 765.1 Kb (ftp)(http) BED
GSE256555_ENCFF678FCQ_optimal_IDR_thresholded_peaks_dm6.bigBed 132.0 Kb (ftp)(http) BIGBED
GSE256555_ENCFF706DNO_signal_of_unique_reads_dm6.bigWig 16.9 Mb (ftp)(http) BIGWIG
GSE256555_ENCFF735INH_optimal_IDR_thresholded_peaks_dm6.bed.gz 48.6 Kb (ftp)(http) BED
GSE256555_ENCFF752OSD_signal_of_unique_reads_dm3.bigWig 14.9 Mb (ftp)(http) BIGWIG
GSE256555_ENCFF754LAS_optimal_IDR_thresholded_peaks_dm3.bigBed 130.5 Kb (ftp)(http) BIGBED
GSE256555_ENCFF883QOP_peaks_and_background_as_input_for_IDR_dm3.bigBed 1.3 Mb (ftp)(http) BIGBED
GSE256555_RAW.tar 197.0 Mb (http)(custom) TAR (of BED, BIGBED, BIGWIG, TXT)
Raw data are available in SRA

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