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Series GSE256555 Query DataSets for GSE256555
Status Public on Feb 27, 2024
Title TF ChIP-seq from whole organism (ENCSR004RJS)
Project modENCODE
Organism Drosophila melanogaster
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ChIP-seq on transgenic flies expressing CG9876-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf
 
Overall design https://www.encodeproject.org/ENCSR004RJS/
 
Citation(s) 22955616
BioProject PRJNA63463
Submission date Feb 24, 2024
Last update date Feb 27, 2024
Contact name ENCODE DCC
E-mail(s) encode-help@lists.stanford.edu
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platforms (1)
GPL13304 Illumina HiSeq 2000 (Drosophila melanogaster)
Samples (2)
GSM8106142 TF ChIP-seq from whole organism (ENCLB211URW)
GSM8106143 TF ChIP-seq from whole organism (ENCLB245AOF)

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE256555_ENCFF084OPE_optimal_IDR_thresholded_peaks_dm3.bed.gz 47.5 Kb (ftp)(http) BED
GSE256555_ENCFF192QCJ_peaks_and_background_as_input_for_IDR_dm6.bed.gz 763.6 Kb (ftp)(http) BED
GSE256555_ENCFF255UHF_peaks_and_background_as_input_for_IDR_dm6.bigBed 1.3 Mb (ftp)(http) BIGBED
GSE256555_ENCFF317ATG_control_normalized_signal_dm6.bigWig 16.6 Mb (ftp)(http) BIGWIG
GSE256555_ENCFF343QGE_read-depth_normalized_signal_dm3.bigWig 14.8 Mb (ftp)(http) BIGWIG
GSE256555_ENCFF385BZX_read-depth_normalized_signal_dm6.bigWig 16.9 Mb (ftp)(http) BIGWIG
GSE256555_ENCFF598RCK_control_normalized_signal_dm3.bigWig 15.3 Mb (ftp)(http) BIGWIG
GSE256555_ENCFF675WCT_peaks_and_background_as_input_for_IDR_dm3.bed.gz 765.1 Kb (ftp)(http) BED
GSE256555_ENCFF678FCQ_optimal_IDR_thresholded_peaks_dm6.bigBed 132.0 Kb (ftp)(http) BIGBED
GSE256555_ENCFF706DNO_signal_of_unique_reads_dm6.bigWig 16.9 Mb (ftp)(http) BIGWIG
GSE256555_ENCFF735INH_optimal_IDR_thresholded_peaks_dm6.bed.gz 48.6 Kb (ftp)(http) BED
GSE256555_ENCFF752OSD_signal_of_unique_reads_dm3.bigWig 14.9 Mb (ftp)(http) BIGWIG
GSE256555_ENCFF754LAS_optimal_IDR_thresholded_peaks_dm3.bigBed 130.5 Kb (ftp)(http) BIGBED
GSE256555_ENCFF883QOP_peaks_and_background_as_input_for_IDR_dm3.bigBed 1.3 Mb (ftp)(http) BIGBED
GSE256555_RAW.tar 197.0 Mb (http)(custom) TAR (of BED, BIGBED, BIGWIG, TXT)
Raw data are available in SRA

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