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Series GSE256571 Query DataSets for GSE256571
Status Public on Feb 27, 2024
Title TF ChIP-seq from whole organism (ENCSR187ZBO)
Project modENCODE
Organism Caenorhabditis elegans
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ChIP-seq against eGFP-nhr-6 in L4 larva worms.

For data usage terms and conditions, please refer to and
Overall design
Citation(s) 22955616
BioProject PRJNA63463
Submission date Feb 24, 2024
Last update date Feb 27, 2024
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platforms (1)
GPL13776 Illumina Genome Analyzer IIx (Caenorhabditis elegans)
Samples (2)
GSM8106171 TF ChIP-seq from whole organism (ENCLB386BSH)
GSM8106172 TF ChIP-seq from whole organism (ENCLB968IOV)

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE256571_ENCFF019EEI_read-depth_normalized_signal_ce11.bigWig 9.7 Mb (ftp)(http) BIGWIG
GSE256571_ENCFF060ISL_peaks_and_background_as_input_for_IDR_ce11.bigBed 1.2 Mb (ftp)(http) BIGBED
GSE256571_ENCFF189NVJ_peaks_and_background_as_input_for_IDR_ce10.bigBed 1.2 Mb (ftp)(http) BIGBED
GSE256571_ENCFF208WOS_optimal_IDR_thresholded_peaks_ce11.bigBed 132.7 Kb (ftp)(http) BIGBED
GSE256571_ENCFF245GZT_read-depth_normalized_signal_ce10.bigWig 9.7 Mb (ftp)(http) BIGWIG
GSE256571_ENCFF306XLV_signal_of_unique_reads_ce11.bigWig 9.7 Mb (ftp)(http) BIGWIG
GSE256571_ENCFF329XSB_optimal_IDR_thresholded_peaks_ce10.bed.gz 48.0 Kb (ftp)(http) BED
GSE256571_ENCFF373MTH_peaks_and_background_as_input_for_IDR_ce10.bed.gz 743.8 Kb (ftp)(http) BED
GSE256571_ENCFF373UOZ_peaks_and_background_as_input_for_IDR_ce11.bed.gz 743.8 Kb (ftp)(http) BED
GSE256571_ENCFF697SMT_control_normalized_signal_ce10.bigWig 9.8 Mb (ftp)(http) BIGWIG
GSE256571_ENCFF712FJS_optimal_IDR_thresholded_peaks_ce11.bed.gz 50.0 Kb (ftp)(http) BED
GSE256571_ENCFF780OXH_control_normalized_signal_ce11.bigWig 9.8 Mb (ftp)(http) BIGWIG
GSE256571_ENCFF787DEC_optimal_IDR_thresholded_peaks_ce10.bigBed 129.8 Kb (ftp)(http) BIGBED
GSE256571_ENCFF831DUP_signal_of_unique_reads_ce10.bigWig 9.7 Mb (ftp)(http) BIGWIG
GSE256571_RAW.tar 124.0 Mb (http)(custom) TAR (of BED, BIGBED, BIGWIG, TXT)
Raw data are available in SRA

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