GEO Accession viewer

NCBI > GEO > Accession Display

Not logged in | Login

GEO help: Mouse over screen elements for information.

Series GSE256579

Query DataSets for GSE256579

Status

Public on Feb 27, 2024

Title

Histone ChIP-seq from BLaER1 (ENCSR105FGG)

Project

ENCODE

Organism

Homo sapiens

Experiment type

Genome binding/occupancy profiling by high throughput sequencing

Summary

H3K4me3 ChIP-Seq on BLaER1 cell line after 36 h treatment with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Overall design

https://www.encodeproject.org/ENCSR105FGG/

Citation(s)

22955616

BioProject

PRJNA63443

Submission date

Feb 24, 2024

Last update date

Mar 13, 2024

Contact name

ENCODE DCC

E-mail(s)

encode-help@lists.stanford.edu

Organization name

ENCODE DCC

Street address

300 Pasteur Dr

City

Stanford

State/province

ZIP/Postal code

94305-5120

Country

USA

Platforms (1)

GPL11154

Illumina HiSeq 2000 (Homo sapiens)

Samples (2)

GSM8106184	Histone ChIP-seq from BLaER1 (ENCLB332FYO)
GSM8106185	Histone ChIP-seq from BLaER1 (ENCLB459KXC)

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML
Series Matrix File(s)	TXT

Supplementary file	Size	Download	File type/resource
GSE256579_ENCFF181NSR_pseudoreplicated_peaks_GRCh38.bigBed	2.0 Mb	(ftp)(http)	BIGBED
GSE256579_ENCFF255ECB_peaks_GRCh38.bigBed	266.1 Kb	(ftp)(http)	BIGBED
GSE256579_ENCFF284IBJ_pseudoreplicated_peaks_GRCh38.bed.gz	942.1 Kb	(ftp)(http)	BED
GSE256579_ENCFF296OWZ_signal_p-value_GRCh38.bigWig	1.5 Gb	(ftp)(http)	BIGWIG
GSE256579_ENCFF431AVY_fold_change_over_control_GRCh38.bigWig	1.5 Gb	(ftp)(http)	BIGWIG
GSE256579_ENCFF500IDV_peaks_GRCh38.bed.gz	134.6 Kb	(ftp)(http)	BED
GSE256579_ENCFF620KVG_replicated_peaks_GRCh38.bed.gz	906.3 Kb	(ftp)(http)	BED
GSE256579_ENCFF675ABR_replicated_peaks_GRCh38.bigBed	1.9 Mb	(ftp)(http)	BIGBED
GSE256579_RAW.tar	8.4 Gb	(http)(custom)	TAR (of BED, BIGBED, BIGWIG, TXT)
Raw data are available in SRA