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Series GSE256581 Query DataSets for GSE256581
Status Public on Feb 27, 2024
Title TF ChIP-seq from whole organism (ENCSR190CJZ)
Project modENCODE
Organism Drosophila melanogaster
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ChIP-seq on transgenic flies expressing CG9609-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf
 
Overall design https://www.encodeproject.org/ENCSR190CJZ/
 
Citation(s) 22955616
BioProject PRJNA63463
Submission date Feb 24, 2024
Last update date Sep 25, 2024
Contact name ENCODE DCC
E-mail(s) encode-help@lists.stanford.edu
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platforms (1)
GPL17275 Illumina HiSeq 2500 (Drosophila melanogaster)
Samples (3)
GSM8106187 TF ChIP-seq from whole organism (ENCLB898GDD)
GSM8106188 TF ChIP-seq from whole organism (ENCLB778SML)
GSM8106189 TF ChIP-seq from whole organism (ENCLB041MMF)
Relations
Reanalyzed by GSE278063

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE256581_ENCFF014BWB_control_normalized_signal_dm6.bigWig 16.6 Mb (ftp)(http) BIGWIG
GSE256581_ENCFF120MCT_peaks_and_background_as_input_for_IDR_dm6.bigBed 1.2 Mb (ftp)(http) BIGBED
GSE256581_ENCFF292IEK_control_normalized_signal_dm3.bigWig 15.3 Mb (ftp)(http) BIGWIG
GSE256581_ENCFF308OHV_optimal_IDR_thresholded_peaks_dm6.bed.gz 87.0 Kb (ftp)(http) BED
GSE256581_ENCFF607WGM_optimal_IDR_thresholded_peaks_dm3.bigBed 158.0 Kb (ftp)(http) BIGBED
GSE256581_ENCFF755RLP_peaks_and_background_as_input_for_IDR_dm3.bed.gz 646.6 Kb (ftp)(http) BED
GSE256581_ENCFF810SPM_optimal_IDR_thresholded_peaks_dm3.bed.gz 67.1 Kb (ftp)(http) BED
GSE256581_ENCFF821HBE_peaks_and_background_as_input_for_IDR_dm3.bigBed 1.1 Mb (ftp)(http) BIGBED
GSE256581_ENCFF880ZLL_read-depth_normalized_signal_dm6.bigWig 16.9 Mb (ftp)(http) BIGWIG
GSE256581_ENCFF905MYD_signal_of_unique_reads_dm3.bigWig 14.9 Mb (ftp)(http) BIGWIG
GSE256581_ENCFF965WTV_signal_of_unique_reads_dm6.bigWig 16.9 Mb (ftp)(http) BIGWIG
GSE256581_ENCFF984EWJ_optimal_IDR_thresholded_peaks_dm6.bigBed 214.4 Kb (ftp)(http) BIGBED
GSE256581_ENCFF991XMT_peaks_and_background_as_input_for_IDR_dm6.bed.gz 745.7 Kb (ftp)(http) BED
GSE256581_ENCFF995JWZ_read-depth_normalized_signal_dm3.bigWig 14.8 Mb (ftp)(http) BIGWIG
GSE256581_RAW.tar 294.1 Mb (http)(custom) TAR (of BED, BIGBED, BIGWIG, TXT)
Raw data are available in SRA

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