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Series GSE256852 Query DataSets for GSE256852
Status Public on Feb 27, 2024
Title TF ChIP-seq from whole organism (ENCSR133RTP)
Project modENCODE
Organism Caenorhabditis elegans
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ChIP-seq of transgenic worms expressing MADF-10-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.

For data usage terms and conditions, please refer to and
Overall design
Citation(s) 22955616
BioProject PRJNA63463
Submission date Feb 24, 2024
Last update date Feb 27, 2024
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platforms (2)
GPL13657 Illumina HiSeq 2000 (Caenorhabditis elegans)
GPL18245 Illumina HiSeq 2500 (Caenorhabditis elegans)
Samples (2)
GSM8106675 TF ChIP-seq from whole organism (ENCLB517JHT)
GSM8106676 TF ChIP-seq from whole organism (ENCLB216KDQ)

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE256852_ENCFF004CRB_optimal_IDR_thresholded_peaks_ce10.bed.gz 54.9 Kb (ftp)(http) BED
GSE256852_ENCFF056ODN_signal_of_unique_reads_ce11.bigWig 9.6 Mb (ftp)(http) BIGWIG
GSE256852_ENCFF274DUL_peaks_and_background_as_input_for_IDR_ce10.bigBed 1.2 Mb (ftp)(http) BIGBED
GSE256852_ENCFF274SYV_peaks_and_background_as_input_for_IDR_ce10.bed.gz 751.2 Kb (ftp)(http) BED
GSE256852_ENCFF363QUH_optimal_IDR_thresholded_peaks_ce11.bigBed 108.8 Kb (ftp)(http) BIGBED
GSE256852_ENCFF411SPA_peaks_and_background_as_input_for_IDR_ce11.bed.gz 751.2 Kb (ftp)(http) BED
GSE256852_ENCFF425FCA_optimal_IDR_thresholded_peaks_ce10.bigBed 132.8 Kb (ftp)(http) BIGBED
GSE256852_ENCFF551AQN_peaks_and_background_as_input_for_IDR_ce11.bigBed 1.2 Mb (ftp)(http) BIGBED
GSE256852_ENCFF592CXC_optimal_IDR_thresholded_peaks_ce11.bed.gz 36.4 Kb (ftp)(http) BED
GSE256852_ENCFF624STC_read-depth_normalized_signal_ce10.bigWig 9.6 Mb (ftp)(http) BIGWIG
GSE256852_ENCFF627LXA_control_normalized_signal_ce11.bigWig 9.8 Mb (ftp)(http) BIGWIG
GSE256852_ENCFF758YRV_signal_of_unique_reads_ce10.bigWig 9.6 Mb (ftp)(http) BIGWIG
GSE256852_ENCFF849QJE_read-depth_normalized_signal_ce11.bigWig 9.6 Mb (ftp)(http) BIGWIG
GSE256852_ENCFF887EAR_control_normalized_signal_ce10.bigWig 9.8 Mb (ftp)(http) BIGWIG
GSE256852_RAW.tar 123.3 Mb (http)(custom) TAR (of BED, BIGBED, BIGWIG, TXT)
Raw data are available in SRA

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