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| Status |
Public on Oct 03, 2024 |
| Title |
Young and Aged Striatal Astrocyte MERFISH Panel |
| Platform organism |
synthetic construct |
| Sample organism |
Mus musculus |
| Experiment type |
Other
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| Summary |
Given that the striatum is a large, multifunctional nucleus, we next aimed to understand where astrocyte subtypes exist in the striatum at a single-cell resolution using MERFISH. We reproducibly identified the seven astrocyte subtypes, some of which were dorsal (A1, A7), medial (A3, A6) or ventral dominant (A4).
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| Overall design |
MERFISH was performed according to Vizgen's instructions. Data was initally processed using MERLIN, and cell segmentation completed with Vizgen software.
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| Contributor(s) |
Linker K, Khakh B |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
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| Submission date |
Mar 20, 2024 |
| Last update date |
Oct 04, 2024 |
| Contact name |
Kay Linker |
| E-mail(s) |
kaylinker@gmail.com
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| Organization name |
UCLA
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| Department |
Physiology
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| Lab |
Khakh Lab
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| Street address |
10833 Le Conte Avenue, 53-263 CHS
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| City |
Los Angeles |
| State/province |
California |
| ZIP/Postal code |
90095-175 |
| Country |
USA |
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| Platforms (1) |
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| Samples (4)
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| Relations |
| BioProject |
PRJNA1090141 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE262083_RAW.tar |
50.9 Mb |
(http)(custom) |
TAR (of CSV) |
| GSE262083_processed_data.txt.gz |
11.1 Kb |
(ftp)(http) |
TXT |
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