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Series GSE262155 Query DataSets for GSE262155
Status Public on Mar 28, 2024
Title Metabolism of L-arabinose converges with virulence regulation to promote enteric pathogen fitness
Organism Escherichia coli O157:H7
Experiment type Expression profiling by high throughput sequencing
Summary Role of L-arabinose on gene expression in E. coli O157:H7 TUV93-0 where CTRL samples were grown in the absence of L-arabinose and ARA samples were grown in the presence of L-arabinose.
 
Overall design 3 independent biological replicates were grown in the presence or absence of L-arabinose (total of 6 samples )
 
Contributor(s) Connolly J, Cottam C
Citation(s) 38796512
Submission date Mar 21, 2024
Last update date Jun 12, 2024
Contact name Curtis Cottam
E-mail(s) curtis.cottam@ncl.ac.uk
Organization name Newcastle University
Department Biosciences Institute
Street address The Medical School, Newcastle University, Framlington Place
City Newcastle upon Tyne
ZIP/Postal code NE2 4HH
Country United Kingdom
 
Platforms (1)
GPL34321 Illumina NextSeq 500 (Escherichia coli O157:H7)
Samples (6)
GSM8158834 Control, biological replicate 1
GSM8158835 Control, biological replicate 2
GSM8158836 Control, biological replicate 3
Relations
BioProject PRJNA1090487

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE262155_RAW.tar 390.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA

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