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Series GSE27030 Query DataSets for GSE27030
Status Public on Jan 25, 2012
Title Genome-wide binding profiles of the B-Myb-MuvB complex in HeLa cells
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary To identify genomic regions bound by B-Myb and LIN9 (a subunit of the MuvB complex), we performed ChIP-Sequencing (ChIP-Seq) using chromatin from proliferating HeLa cells in which we can detect a robust association between B-Myb and subunits of the MuvB complex. This analysis allowed us identify late cell cycle or G2/M expressed genes as specific targets of the B-Myb-MuvB complex.
Overall design Examination of B-Myb and LIN9 binding in asynchronously growing HeLa cells
Contributor(s) Sadasivam S, DeCaprio JA
Citation(s) 22391450
Submission date Feb 02, 2011
Last update date May 15, 2019
Contact name Subhashini Sadasivam
Organization name Dana Farber Cancer Insitute
Department Medical Oncology
Lab Laboratory of James DeCaprio, Mayer 444
Street address 450 Brookline Avenue
City Boston
State/province MA
ZIP/Postal code 02215
Country USA
Platforms (1)
GPL9115 Illumina Genome Analyzer II (Homo sapiens)
Samples (6)
GSM665905 Input_ChIPSeq_HeLa_Rep1
GSM665906 Input_ChIPSeq_HeLa_Rep2
GSM665907 LIN9_ChIPSeq_HeLa_Rep1
This SubSeries is part of SuperSeries:
GSE27031 The MuvB complex sequentially recruits B-Myb and FoxM1 to promote mitotic gene expression
SRA SRP005609
BioProject PRJNA142047

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE27030_ChIP_protocol.pdf.gz 7.9 Kb (ftp)(http) PDF
GSE27030_RAW.tar 4.2 Gb (http)(custom) TAR (of BAM)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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