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Series GSE28030 Query DataSets for GSE28030
Status Public on Apr 28, 2011
Title Affymetrix SNP array data for Chronic Lymphocytic Leukemia_diagnostic sample_patient samples
Organism Homo sapiens
Experiment type Genome variation profiling by SNP array
SNP genotyping by SNP array
Summary High-resolution genomic microarrays provides simultaneous detection of copy-number aberrations such as the known recurrent aberrations in Chronic Lymphocytic Leukemia_diagnostic sample_patient (del(11q), del(13q), del(17p) and trisomy 12), and copy-number neutral loss of heterozygosity. We screened 369 newly diagnosed Chronic Lymphocytic Leukemia_diagnostic sample_patient patient samples from a population-based cohort using 250K single nucleotide polymorphism-arrays.
 
Overall design Affymetrix SNP arrays were performed according to the manufacturer's directions on DNA extracted from peripheral blood samples.
 
Contributor(s) Gunnarsson R, Rasmussen M
Citation(s) 21546498
Submission date Mar 17, 2011
Last update date May 17, 2017
Contact name Anders Isaksson
E-mail(s) anders.isaksson@medsci.uu.se
Organization name Uppsala University
Street address Akademiska sjukhuset ing61 3tr
City Uppsala
ZIP/Postal code 75185
Country Sweden
 
Platforms (1)
GPL3718 [Mapping250K_Nsp] Affymetrix Mapping 250K Nsp SNP Array
Samples (369)
GSM693283 Chronic Lymphocytic Leukemia_diagnostic sample_patient SCAN2
GSM693284 Chronic Lymphocytic Leukemia_diagnostic sample_patient SCAN3
GSM693285 Chronic Lymphocytic Leukemia_diagnostic sample_patient SCAN4
Relations
BioProject PRJNA137981

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE28030_RAW.tar 10.5 Gb (http)(custom) TAR (of CEL, CNCHP)
Processed data included within Sample table
Processed data provided as supplementary file
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