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Series GSE28114 Query DataSets for GSE28114
Status Public on Jun 30, 2011
Title A comprehensive assessment of array-based platforms and calling algorithms for detection of copy number variants (244A)
Organism Homo sapiens
Experiment type Genome variation profiling by genome tiling array
Summary Systematic evaluation of eleven array platforms commonly used for CNV detection to address parameters of quality and CNV calling.
 
Overall design 18 Samples
 
Contributor(s) Pinto D, MacDonald JR
Citation(s) 21552272
Submission date Mar 22, 2011
Last update date Oct 26, 2016
Contact name Stephen W Scherer
E-mail(s) stephen.scherer@sickkids.ca
Organization name The Hospital for Sick Children
Department Genetics and Genomic Biology
Street address 686 Bay Street
City Toronto
State/province Ontario
ZIP/Postal code M5G 0A4
Country Canada
 
Platforms (1)
GPL4091 Agilent-014693 Human Genome CGH Microarray 244A (Feature number version)
Samples (18)
GSM696418 NA10851 rep1 genotyping at TCAG (244A)
GSM696419 NA15510 rep1 genotyping at TCAG (244A)
GSM696420 NA12239 rep1 genotyping at TCAG (244A)
This SubSeries is part of SuperSeries:
GSE25893 A comprehensive assessment of array-based platforms and calling algorithms for detection of copy number variants
Relations
BioProject PRJNA139833

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE28114_RAW.tar 1.3 Gb (http)(custom) TAR (of TXT)
Processed data included within Sample table
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