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Series GSE28225 Query DataSets for GSE28225
Status Public on Jun 30, 2011
Title Detection of S. cerevisiae fragments in the genome of S. bayanus strains with aCGH on Yeast_2 Affymetrix array.
Platform organisms Schizosaccharomyces pombe; Saccharomyces cerevisiae
Sample organisms Saccharomyces bayanus; Saccharomyces uvarum
Experiment type Genome variation profiling by array
Summary The aim of this project was to detect S. cerevisiae fragments in the genome of S. bayanus Type strain CBS380 and pure line NBRC1948 (=IFO1948).
The hybridization signal is compared to S. uvarum BBS7001 whose genome has been sequenced and in which no S. cerevisiae sequence has been detected.
Overall design Comparison CBS380 (2 arrays) or IFO1948 (one array) to CBS 7001 (2 arrays).
Contributor(s) Nguyen H, Legras JL, Neuveglise C, Gaillardin C
Citation(s) 21998701
Submission date Mar 28, 2011
Last update date Feb 21, 2017
Contact name Jean-Luc Legras
Organization name INRA
Department UMR1083, Science pour l'Oenologie
Lab Equipe Microbiologie - Physiologie Integrative
Street address 2, place Viala
City Montpellier cedex1
ZIP/Postal code 34060
Country France
Platforms (1)
GPL2529 [Yeast_2] Affymetrix Yeast Genome 2.0 Array
Samples (5)
GSM698629 Saccharomyces bayanus CBS380 rep1
GSM698630 Saccharomyces bayanus CBS380 rep2
GSM698631 Saccharomyces bayanus IFO1948
BioProject PRJNA139611

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE28225_RAW.tar 5.6 Mb (http)(custom) TAR (of CEL)
GSE28225_intensities.txt.gz 1.6 Mb (ftp)(http) TXT
GSE28225_logratios.txt.gz 486.8 Kb (ftp)(http) TXT
Processed data are available on Series record

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