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Series GSE28771 Query DataSets for GSE28771
Status Public on May 02, 2011
Title seq-WA30932379_H3K9ac_N2_L3
Project modENCODE
Organism Caenorhabditis elegans
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ChIP-seq analysis of elements that specify nucleosome positioning and occupancy, control domains of gene expression, induce repression of the X chromosome, guide mitotic segregation and genome duplication, govern homolog pairing and recombination during meiosis, and organize chromosome positioning within the nucleus.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODEDataReleasePolicyFinal2008.pdf
 
Overall design ChIP-seq against H3K9ac in L3 stage N2 worms.
Web link http://www.ncbi.nlm.nih.gov/geo/info/ENCODE.html
 
Contributor(s) Ahringer J, Latorre I
Citation missing Has this study been published? Please login to update or notify GEO.
BioProject PRJNA63455
Submission date Apr 20, 2011
Last update date May 15, 2019
Contact name Tristan De Buysscher
Organization name University of North Carolina at Chapel Hill
Department Biology
Lab Lieb
Street address CB# 3280, Coker Hall
City Chapel Hill
State/province NC
ZIP/Postal code 27599-3280
Country USA
 
Platforms (1)
GPL9269 Illumina Genome Analyzer II (Caenorhabditis elegans)
Samples (4)
GSM706164 seq-NA_N2_L3_2 [input DNA]
GSM706167 seq-NA_N2_L3_IL-2 [input DNA]
GSM713168 seq-WA30932379_H3K9ac_N2_L3_1
Relations
SRA SRP006507

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE28771_RAW.tar 120.5 Mb (http)(custom) TAR (of GFF, WIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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