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Series GSE28798 Query DataSets for GSE28798
Status Public on Jun 08, 2011
Title Cell-type-specific target selection by combinatorial binding of Smad2/3 and hepatocyte nuclear factor 4-alpha in HepG2 cells
Organism Homo sapiens
Experiment type Expression profiling by array
Genome binding/occupancy profiling by genome tiling array
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 21646355
Submission date Apr 21, 2011
Last update date Mar 25, 2019
Contact name Daizo Koinuma
E-mail(s) d-koinuma@umin.ac.jp
Organization name University of Tokyo
Department Pathology
Street address Hongo 7-3-1, Bunkyo-ku
City Tokyo
ZIP/Postal code 113-0033
Country Japan
 
Platforms (3)
GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
GPL5082 [Hs_PromPR] Affymetrix Human Promoter 1.0R Array
GPL9115 Illumina Genome Analyzer II (Homo sapiens)
Samples (11)
GSM707672 HepG2_siControl_0h
GSM707673 HepG2_siControl_TGF-beta_1p5h
GSM707674 HepG2_siControl_TGF-beta_24h
This SuperSeries is composed of the following SubSeries:
GSE28590 Expression data of the human hepatoblastoma cell line HepG2 treated with TGF-beta
GSE28797 Smad2/3 binding sites in HaCaT, HepG2, and Hep3B cells determined by an Affymetrix promoter array
GSE28845 HNF4A-binding sites in HepG2 hepatoblastoma cells treated with TGF-beta
Relations
BioProject PRJNA138817

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE28798_RAW.tar 376.1 Mb (http)(custom) TAR (of BAR, BED, CEL, WIG)

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