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Status |
Public on Jan 31, 2016 |
Title |
Expression analysis of colorectal carcinoma cells with overexpressed TP53 using TileShuffle |
Organism |
Homo sapiens |
Experiment type |
Expression profiling by genome tiling array
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Summary |
Whole transcriptome expression analysis of colorectal carcinoma cells with induced expression of TP53 on Affymetrix Human Tiling 1.0 array set. Expression data were processed with our new permutation approach TileShuffle.
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Overall design |
We analyzed one Affymetrix Human Tiling 1.0R set
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Contributor(s) |
Reiche K, Kretzschmar A, Horn F, Hackermüller J, Engeland K |
Citation missing |
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Submission date |
Jun 08, 2011 |
Last update date |
Jan 31, 2016 |
Contact name |
Kristin Reiche |
E-mail(s) |
kristin.reiche@izi.fraunhofer.de
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Organization name |
Fraunhofer Institute for Cell Therapy and Immunology
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Department |
Diagnostics
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Street address |
Perlickstr. 1
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City |
Leipzig |
ZIP/Postal code |
04103 |
Country |
Germany |
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Platforms (14)
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GPL6156 |
[Hs35b_M01R] Affymetrix Human Tiling 1.0R Set, Array 1 |
GPL6157 |
[Hs35b_M02R] Affymetrix Human Tiling 1.0R Set, Array 2 |
GPL6158 |
[Hs35b_M03R] Affymetrix Human Tiling 1.0R Set, Array 3 |
GPL6159 |
[Hs35b_M04R] Affymetrix Human Tiling 1.0R Set, Array 4 |
GPL6160 |
[Hs35b_M05R] Affymetrix Human Tiling 1.0R Set, Array 5 |
GPL6161 |
[Hs35b_M06R] Affymetrix Human Tiling 1.0R Set, Array 6 |
GPL6162 |
[Hs35b_M07R] Affymetrix Human Tiling 1.0R Set, Array 7 |
GPL6163 |
[Hs35b_M08R] Affymetrix Human Tiling 1.0R Set, Array 8 |
GPL6164 |
[Hs35b_M09R] Affymetrix Human Tiling 1.0R Set, Array 9 |
GPL6165 |
[Hs35b_M10R] Affymetrix Human Tiling 1.0R Set, Array 10 |
GPL6166 |
[Hs35b_M11R] Affymetrix Human Tiling 1.0R Set, Array 11 |
GPL6167 |
[Hs35b_M12R] Affymetrix Human Tiling 1.0R Set, Array 12 |
GPL6168 |
[Hs35b_M13R] Affymetrix Human Tiling 1.0R Set, Array 13 |
GPL6169 |
[Hs35b_M14R] Affymetrix Human Tiling 1.0R Set, Array 14 |
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Samples (14)
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GSM739426 |
colorectal carcinoma cells with overexpressed TP53 using TileShuffle ChipA |
GSM739427 |
colorectal carcinoma cells with overexpressed TP53 using TileShuffle ChipB |
GSM739428 |
colorectal carcinoma cells with overexpressed TP53 using TileShuffle ChipC |
GSM739429 |
colorectal carcinoma cells with overexpressed TP53 using TileShuffle ChipD |
GSM739430 |
colorectal carcinoma cells with overexpressed TP53 using TileShuffle ChipE |
GSM739431 |
colorectal carcinoma cells with overexpressed TP53 using TileShuffle ChipF |
GSM739432 |
colorectal carcinoma cells with overexpressed TP53 using TileShuffle ChipG |
GSM739433 |
colorectal carcinoma cells with overexpressed TP53 using TileShuffle ChipH |
GSM739434 |
colorectal carcinoma cells with overexpressed TP53 using TileShuffle ChipI |
GSM739435 |
colorectal carcinoma cells with overexpressed TP53 using TileShuffle ChipJ |
GSM739436 |
colorectal carcinoma cells with overexpressed TP53 using TileShuffle ChipK |
GSM739437 |
colorectal carcinoma cells with overexpressed TP53 using TileShuffle ChipL |
GSM739438 |
colorectal carcinoma cells with overexpressed TP53 using TileShuffle ChipM |
GSM739439 |
colorectal carcinoma cells with overexpressed TP53 using TileShuffle ChipN |
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This SubSeries is part of SuperSeries: |
GSE29970 |
Differential expression analysis of colorectal carcinoma cells (defunct TP53 versus active TP53) using TileShuffle |
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Relations |
BioProject |
PRJNA155241 |