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Status |
Public on Jan 31, 2016 |
Title |
Expression analysis of INA6 cells after IL-6 withdrawal using TileShuffle |
Organism |
Homo sapiens |
Experiment type |
Expression profiling by genome tiling array
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Summary |
Whole transcriptome expression analysis of INA6 cells on Affymetrix Human Tiling 1.0 array set. IL-6 has been withdrawn for 13 hours which initiates apoptosis. Expression data were processed with our new permutation approach TileShuffle.
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Overall design |
We analyzed one Affymetrix Human Tiling 1.0R set
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Contributor(s) |
Reiche K, Kretzschmar A, Horn F, Hackermüller J, Engeland K |
Citation missing |
Has this study been published? Please login to update or notify GEO. |
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Submission date |
Jun 15, 2011 |
Last update date |
Jan 31, 2016 |
Contact name |
Kristin Reiche |
E-mail(s) |
kristin.reiche@izi.fraunhofer.de
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Organization name |
Fraunhofer Institute for Cell Therapy and Immunology
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Department |
Diagnostics
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Street address |
Perlickstr. 1
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City |
Leipzig |
ZIP/Postal code |
04103 |
Country |
Germany |
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Platforms (14)
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GPL6156 |
[Hs35b_M01R] Affymetrix Human Tiling 1.0R Set, Array 1 |
GPL6157 |
[Hs35b_M02R] Affymetrix Human Tiling 1.0R Set, Array 2 |
GPL6158 |
[Hs35b_M03R] Affymetrix Human Tiling 1.0R Set, Array 3 |
GPL6159 |
[Hs35b_M04R] Affymetrix Human Tiling 1.0R Set, Array 4 |
GPL6160 |
[Hs35b_M05R] Affymetrix Human Tiling 1.0R Set, Array 5 |
GPL6161 |
[Hs35b_M06R] Affymetrix Human Tiling 1.0R Set, Array 6 |
GPL6162 |
[Hs35b_M07R] Affymetrix Human Tiling 1.0R Set, Array 7 |
GPL6163 |
[Hs35b_M08R] Affymetrix Human Tiling 1.0R Set, Array 8 |
GPL6164 |
[Hs35b_M09R] Affymetrix Human Tiling 1.0R Set, Array 9 |
GPL6165 |
[Hs35b_M10R] Affymetrix Human Tiling 1.0R Set, Array 10 |
GPL6166 |
[Hs35b_M11R] Affymetrix Human Tiling 1.0R Set, Array 11 |
GPL6167 |
[Hs35b_M12R] Affymetrix Human Tiling 1.0R Set, Array 12 |
GPL6168 |
[Hs35b_M13R] Affymetrix Human Tiling 1.0R Set, Array 13 |
GPL6169 |
[Hs35b_M14R] Affymetrix Human Tiling 1.0R Set, Array 14 |
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Samples (14)
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GSM739398 |
INA6 cells using TileShuffle (IL-6 withdrawal) ChipA |
GSM739399 |
INA6 cells using TileShuffle (IL-6 withdrawal) ChipB |
GSM739400 |
INA6 cells using TileShuffle (IL-6 withdrawal) ChipC |
GSM739401 |
INA6 cells using TileShuffle (IL-6 withdrawal) ChipD |
GSM739402 |
INA6 cells using TileShuffle (IL-6 withdrawal) ChipE |
GSM739403 |
INA6 cells using TileShuffle (IL-6 withdrawal) ChipF |
GSM739404 |
INA6 cells using TileShuffle (IL-6 withdrawal) ChipG |
GSM739405 |
INA6 cells using TileShuffle (IL-6 withdrawal) ChipH |
GSM739406 |
INA6 cells using TileShuffle (IL-6 withdrawal) ChipI |
GSM739407 |
INA6 cells using TileShuffle (IL-6 withdrawal) ChipJ |
GSM739408 |
INA6 cells using TileShuffle (IL-6 withdrawal) ChipK |
GSM739409 |
INA6 cells using TileShuffle (IL-6 withdrawal) ChipL |
GSM739410 |
INA6 cells using TileShuffle (IL-6 withdrawal) ChipM |
GSM739411 |
INA6 cells using TileShuffle (IL-6 withdrawal) ChipN |
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This SubSeries is part of SuperSeries: |
GSE30008 |
Differential expression analysis of INA6 cells using TileShuffle |
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Relations |
BioProject |
PRJNA155357 |